RNA–Protein interactions for RNA: ENST00000378409.7

CCDC107-204, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 1,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-204ENST00000378409 SLC17A3O00476 420 aa11.9□□□□□ -0.5
CCDC107-204ENST00000378409 HAGHQ16775 308 aa11.9□□□□□ -0.5
CCDC107-204ENST00000378409 CD300EQ496F6 205 aaPredicted RBP11.9□□□□□ -0.5
CCDC107-204ENST00000378409 RBPMS2Q6ZRY4 209 aaKnown RBP11.9□□□□□ -0.5
CCDC107-204ENST00000378409 GBGT1Q8N5D6 347 aa11.9□□□□□ -0.5
CCDC107-204ENST00000378409 MANBALQ9NQG1 85 aa11.9□□□□□ -0.5
CCDC107-204ENST00000378409 PAGE4O60829 102 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 NDUFB4O95168 129 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 MEOX2P50222 304 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 RANP62826 216 aaKnown RBP11.89□□□□□ -0.51
CCDC107-204ENST00000378409 PDE6HQ13956 83 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 CST9LP1Q5W188 147 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 TMEM61Q8N0U2 210 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 MS4A6AQ9H2W1 248 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 NRN1Q9NPD7 142 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 MED9Q9NWA0 146 aa11.89□□□□□ -0.51
CCDC107-204ENST00000378409 YTHDF2Q9Y5A9 579 aaKnown RBP11.89□□□□□ -0.51
CCDC107-204ENST00000378409 VWFP04275 2813 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 A0A1W2PRE2 83 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 FAM74A7A6NL05 159 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 DNASE2O00115 360 aaPredicted RBP11.88□□□□□ -0.51
CCDC107-204ENST00000378409 ATP6V1G1O75348 118 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 BCL2P10415 239 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 TFPI2P48307 235 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 PMS2P11Q13670 270 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 TOR2AQ5JU69 321 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 WFDC3Q8IUB2 231 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 SLC7A5P1Q8MH63 180 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 C16orf92Q96LL3 132 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 FAM210AQ96ND0 272 aa11.88□□□□□ -0.51
CCDC107-204ENST00000378409 MCRIP2Q9BUT9 160 aaKnown RBP11.88□□□□□ -0.51
CCDC107-204ENST00000378409 LOC102723971A0A1B0GUV8 181 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 RBFOX3A6NFN3 312 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 ZNF253O75346 499 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 PAFAH1B2P68402 229 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 PSG9Q00887 426 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 C9orf66Q5T8R8 295 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 IGFL4Q6B9Z1 124 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 COMMD7Q86VX2 200 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 EXOC3-AS1Q8N2X6 119 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 WFDC9Q8NEX5 89 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 RARRES2Q99969 163 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 SLC50A1Q9BRV3 221 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 EIF5A2Q9GZV4 153 aaKnown RBP11.87□□□□□ -0.51
CCDC107-204ENST00000378409 Q9H3A6 140 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 ARL2-SNX15V9GYD0 113 aa11.87□□□□□ -0.51
CCDC107-204ENST00000378409 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 IZUMO1RA6ND01 250 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 TSPAN4O14817 238 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 ATP5G3P48201 142 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 ICAM4Q14773 271 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 DCANP1Q8TF63 244 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 AAMDCQ9H7C9 122 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 ZNF331Q9NQX6 463 aaPredicted RBP11.86□□□□□ -0.51
CCDC107-204ENST00000378409 OTORQ9NRC9 128 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 VAX2Q9UIW0 290 aa11.86□□□□□ -0.51
CCDC107-204ENST00000378409 SORL1Q92673 2214 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 PGPA6NDG6 321 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 GGTLC3B5MD39 225 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 C11orf94C9JXX5 98 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 SOCS3O14543 225 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 IGLL1P15814 213 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 TAGLN2P37802 199 aaKnown RBP11.85□□□□□ -0.51
CCDC107-204ENST00000378409 INSL3P51460 131 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 SUMO1P63165 101 aaKnown RBP11.85□□□□□ -0.51
CCDC107-204ENST00000378409 GUCA2BQ16661 112 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 ZNF506Q5JVG8 444 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 SAMD13Q5VXD3 122 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 LYPD1Q8N2G4 141 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 RNF182Q8N6D2 247 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 OR2K2Q8NGT1 345 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 RXFP4Q8TDU9 374 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 NOTCH3Q9UM47 2321 aa11.85□□□□□ -0.51
CCDC107-204ENST00000378409 TRAV8-2A0A0B4J237 113 aa11.84□□□□□ -0.51
CCDC107-204ENST00000378409 K7EQG2 157 aa11.84□□□□□ -0.51
CCDC107-204ENST00000378409 ISLRO14498 428 aa11.84□□□□□ -0.51
CCDC107-204ENST00000378409 SLC25A5P05141 298 aaKnown RBP11.84□□□□□ -0.51
CCDC107-204ENST00000378409 HLA-DMBP28068 263 aa11.84□□□□□ -0.51
CCDC107-204ENST00000378409 MEF2BQ02080 365 aaPredicted RBP11.84□□□□□ -0.51
CCDC107-204ENST00000378409 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
CCDC107-204ENST00000378409 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
CCDC107-204ENST00000378409 NKX6-2Q9C056 277 aaPredicted RBP11.84□□□□□ -0.51
CCDC107-204ENST00000378409 TRAV2A0A0B4J234 112 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 RAB19A4D1S5 217 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 OR4C46A6NHA9 309 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 ID1P41134 155 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 SRSF3P84103 164 aaKnown RBP11.83□□□□□ -0.52
CCDC107-204ENST00000378409 PRR31Q5SQ13 230 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 FAM24BQ8N5W8 94 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 CMTM2Q8TAZ6 248 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 TXNDC17Q9BRA2 123 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 RPH3ALQ9UNE2 315 aa11.83□□□□□ -0.52
CCDC107-204ENST00000378409 M0R3E3 92 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 PRB4P10163 310 aaPredicted RBP11.82□□□□□ -0.52
CCDC107-204ENST00000378409 CD81P60033 236 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 PEA15Q15121 130 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 PSG3Q16557 428 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 CCDC28AQ8IWP9 274 aa11.82□□□□□ -0.52
CCDC107-204ENST00000378409 C5orf17Q8NAS9 161 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms