RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 TCRAP04437 139 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 RHOGP84095 191 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 C1orf195Q5TG92 126 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 C15orf53Q8NAA6 179 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 DNAJC30Q96LL9 226 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 MYOD1P15172 320 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 TMEM167AQ8TBQ9 72 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 TRGV9Q99603 122 aa11.87□□□□□ -0.51
PRDM16-203ENST00000378391 CD7P09564 240 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 JMJD8Q96S16 334 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 TIMM23O14925 209 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 VPREB1P12018 145 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 NTF4P34130 210 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 CCL19Q99731 98 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 NPIPB5A8MRT5 1133 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 C22orf46C9J442 243 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 GFRA3O60609 400 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 C10orf55Q5SWW7 151 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 FOXL2NBQ6ZUU3 175 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 TRAV13-1A0A0B4J241 112 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
PRDM16-203ENST00000378391 CRIM1Q9NZV1 1036 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 LAMTOR3Q9UHA4 124 aa11.86□□□□□ -0.51
PRDM16-203ENST00000378391 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 PMS2P5A8MQ11 134 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 Q6P435 159 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 POLEQ07864 2286 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 PPIFP30405 207 aaKnown RBP11.85□□□□□ -0.51
PRDM16-203ENST00000378391 UTF1Q5T230 341 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 ZCCHC24Q8N2G6 241 aaKnown RBP11.85□□□□□ -0.51
PRDM16-203ENST00000378391 RNASE6Q93091 150 aaKnown RBP11.85□□□□□ -0.51
PRDM16-203ENST00000378391 PAX9P55771 341 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 Q6ZRM9 215 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 AMN1Q8IY45 258 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 NUP35Q8NFH5 326 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 PRDM6Q9NQX0 595 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 DAD1P61803 113 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 RPRMLQ8N4K4 120 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 RNF5Q99942 180 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 IL18BPO95998 194 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 IGHV3-11P01762 117 aa11.85□□□□□ -0.51
PRDM16-203ENST00000378391 SLC25A39Q9BZJ4 359 aaPredicted RBP11.85□□□□□ -0.51
PRDM16-203ENST00000378391 DUSP14O95147 198 aaKnown RBP11.84□□□□□ -0.51
PRDM16-203ENST00000378391 GATD1Q8NB37 220 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 LINC00473A8K010 186 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 ZNF726P1Q15940 193 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 TRAV3A0A0B4J244 114 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 ETV2O00321 342 aaPredicted RBP11.84□□□□□ -0.51
PRDM16-203ENST00000378391 OVOL1O14753 267 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 PFN1P07737 140 aaKnown RBP11.84□□□□□ -0.51
PRDM16-203ENST00000378391 CD177Q8N6Q3 437 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 RNASE8Q8TDE3 154 aaKnown RBP11.84□□□□□ -0.51
PRDM16-203ENST00000378391 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.84□□□□□ -0.51
PRDM16-203ENST00000378391 LCN12Q6JVE5 192 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 OVOL2Q9BRP0 275 aa11.84□□□□□ -0.51
PRDM16-203ENST00000378391 D6R8Y8 96 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 LAGE3Q14657 143 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 RSPO1Q2MKA7 263 aaPredicted RBP11.83□□□□□ -0.52
PRDM16-203ENST00000378391 UBE2E2Q96LR5 201 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 LINC01587Q99440 93 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 C7orf69Q9H7B7 122 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 TOMM7Q9P0U1 55 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 IGLV3-1P01715 115 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 UNQ6494/PRO21346Q6UXR6 183 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 ITLN2Q8WWU7 325 aaPredicted RBP11.83□□□□□ -0.52
PRDM16-203ENST00000378391 GTSCR1Q86UQ5 136 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 SSC4DQ8WTU2 575 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 FAM168AQ92567 244 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 SYS1-DBNDD2H3BUS1 97 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 CD24P25063 80 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 EXOC3-AS1Q8N2X6 119 aa11.83□□□□□ -0.52
PRDM16-203ENST00000378391 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
PRDM16-203ENST00000378391 BAALCQ8WXS3 180 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 POLR3KQ9Y2Y1 108 aaPredicted RBP11.82□□□□□ -0.52
PRDM16-203ENST00000378391 HAX1O00165 279 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 HS3ST6Q96QI5 342 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 IGKV1-6A0A0C4DH72 117 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 SOCS3O14543 225 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 LYPD1Q8N2G4 141 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 SCRT1Q9BWW7 348 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 KIAA2026Q5HYC2 2103 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 Q0VG73 95 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 LYZL1Q6UWQ5 148 aa11.82□□□□□ -0.52
PRDM16-203ENST00000378391 C20orf204Q6ZNR8 217 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 IGHV2-26A0A0B4J1V2 119 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 IGHV1-8P0DP01 117 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 PRB3Q04118 309 aaPredicted RBP11.81□□□□□ -0.52
PRDM16-203ENST00000378391 GLMPQ8WWB7 406 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 NCOR1O75376 2440 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 UBL5Q9BZL1 73 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 ACACAQ13085 2346 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 PAX8Q06710 450 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 TMEM200BQ69YZ2 307 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 METRNQ9UJH8 293 aa11.81□□□□□ -0.52
PRDM16-203ENST00000378391 PEMTQ9UBM1 199 aa11.8□□□□□ -0.52
PRDM16-203ENST00000378391 CRPP02741 224 aa11.8□□□□□ -0.52
PRDM16-203ENST00000378391 C16orf54Q6UWD8 224 aa11.8□□□□□ -0.52
PRDM16-203ENST00000378391 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms