RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 NIT1Q86X76 327 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 FNDC4Q9H6D8 234 aaPredicted RBP10.59□□□□□ -0.71
NPHP4-203ENST00000378169 ABCA12Q86UK0 2595 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 ZNF138P52744 262 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 CRIP3Q6Q6R5 217 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 Q6ZPA2 131 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 ZMAT5Q9UDW3 170 aaKnown RBP10.59□□□□□ -0.71
NPHP4-203ENST00000378169 LRRK2Q5S007 2527 aa10.59□□□□□ -0.71
NPHP4-203ENST00000378169 H3BVH4 76 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 LHBP01229 141 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 PRSS2P07478 247 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 ZNF688P0C7X2 276 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
NPHP4-203ENST00000378169 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 FXYD7P58549 80 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 LCN12Q6JVE5 192 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 TEX29Q8N6K0 151 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 FOXC2Q99958 501 aa10.58□□□□□ -0.72
NPHP4-203ENST00000378169 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 H7C2G1 150 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 LBHQ53QV2 105 aaPredicted RBP10.57□□□□□ -0.72
NPHP4-203ENST00000378169 PSMG4Q5JS54 123 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 LINC00311Q8N616 119 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 KAAG1Q9UBP8 84 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 IGKV3OR2-268A0A0C4DH90 116 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 IGF2-ASQ6U949 168 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 CEP192Q8TEP8 1941 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 PF4P02776 101 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 ARL6IP6Q8N6S5 226 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 HIST1H4GQ99525 98 aa10.57□□□□□ -0.72
NPHP4-203ENST00000378169 A6NNC1 897 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 UBE2E1P51965 193 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 SSBP2P81877 361 aaPredicted RBP10.56□□□□□ -0.72
NPHP4-203ENST00000378169 LDLRAD2Q5SZI1 272 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 C10orf91Q5T1B1 145 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 A0A1B0GW15 77 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 DUX3Q96PT4 197 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 SHANK2-AS3Q9BTD1 123 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 TMEM170BQ5T4T1 132 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 C22orf34Q6ZV56 151 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 ERASQ7Z444 233 aa10.56□□□□□ -0.72
NPHP4-203ENST00000378169 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 OVOL3O00110 214 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 TOMM40O96008 361 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 POU2AF1Q16633 256 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 SCGB3A1Q96QR1 104 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 LY96Q9Y6Y9 160 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 TRAV21A0A0B4J279 112 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 OR11H12B2RN74 326 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 RNF223E7ERA6 249 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 LEPP41159 167 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 DNLZQ5SXM8 178 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 DMRTC2Q8IXT2 367 aaPredicted RBP10.55□□□□□ -0.72
NPHP4-203ENST00000378169 OR11H1Q8NG94 326 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 OR11H2Q8NH07 326 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 C5orf30Q96GV9 206 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 NDUFAF3Q9BU61 184 aa10.55□□□□□ -0.72
NPHP4-203ENST00000378169 LOC107984156A0A0G2JMH3 177 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 D6R8Y8 96 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 ARL17AQ8IVW1 177 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 MCRIP2Q9BUT9 160 aaKnown RBP10.54□□□□□ -0.72
NPHP4-203ENST00000378169 CHD3Q12873 2000 aaKnown RBP10.54□□□□□ -0.72
NPHP4-203ENST00000378169 IGLV2-14P01704 120 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 MSMBP08118 114 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PRR20EP86478 221 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PRR20CP86479 221 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PRR20DP86480 221 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PRR20BP86481 221 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PRR20AP86496 221 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 PSG3Q16557 428 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 OR10J3Q5JRS4 329 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 LYPD6BQ8NI32 183 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 GAGE10A6NGK3 116 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 ERCC8Q13216 396 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 DMRTA1Q5VZB9 504 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 RNF182Q8N6D2 247 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 LINC01587Q99440 93 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 JKAMPQ9P055 326 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 DNAH14Q0VDD8 3507 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 SH2D1AO60880 128 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 FCN3O75636 299 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 CACNG7P62955 275 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 Q8NA96 180 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
NPHP4-203ENST00000378169 EMP1P54849 157 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 Q86TA4 180 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 ARMS2P0C7Q2 107 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 MIEN1Q9BRT3 115 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 RHPN1-AS1Q9BWJ2 59 aa10.53□□□□□ -0.72
NPHP4-203ENST00000378169 ARHGAP32A7KAX9 2087 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 IGLC7A0M8Q6 106 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 PLA2G5P39877 138 aa10.52□□□□□ -0.72
NPHP4-203ENST00000378169 NUTF2P61970 127 aaKnown RBP10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms