RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 HS3ST6Q96QI5 342 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 SCRT1Q9BWW7 348 aa6.84□□□□□ -1.31
VPS36-201ENST00000378060 IGHV1-3A0A0C4DH29 117 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 CD5LO43866 347 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 IFI27P40305 119 aaPredicted RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 MPV17L2Q567V2 206 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 EXOC3-AS1Q8N2X6 119 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 CRIM1Q9NZV1 1036 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 IGHV3OR16-12A0A075B7B8 117 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 D6R8Y8 96 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 DUSP14O95147 198 aaKnown RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 COX6B1P14854 86 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 RNASE4P34096 147 aaKnown RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 RSPO1Q2MKA7 263 aaPredicted RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 NUP37Q8NFH4 326 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 POLR3KQ9Y2Y1 108 aaPredicted RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 CD33P20138 364 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 LAGE3Q14657 143 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 LYZL1Q6UWQ5 148 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 ZNF524Q96C55 264 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 GAFA1Q96PS6 74 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 TMEM14BQ9NUH8 114 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 ZNF492Q9P255 531 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 SIGLEC9Q9Y336 463 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 CHTOPQ9Y3Y2 248 aaKnown RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 PDE6HQ13956 83 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 GUSBP1Q15486 140 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 MINOS1Q5TGZ0 78 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 Q8NFD4 153 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 TMEM101Q96IK0 257 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 KLF2Q9Y5W3 355 aaPredicted RBP6.83□□□□□ -1.32
VPS36-201ENST00000378060 MINOS1-NBL1R4GNA1 71 aa6.83□□□□□ -1.32
VPS36-201ENST00000378060 WIPF3A6NGB9 483 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 PSG3Q16557 428 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 ZNF815PA8K554 130 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 EREGO14944 169 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 IGKV1-39P01597 117 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 IGKV1D-39P04432 117 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 ZNF726P1Q15940 193 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 TMEM249Q2WGJ8 235 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 GAGE13Q4V321 117 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 MMP23AO75900 390 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 CD7P09564 240 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 PLNP26678 52 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 VDAC2P45880 294 aaPredicted RBP6.82□□□□□ -1.32
VPS36-201ENST00000378060 TPTE2P1Q5T6R2 138 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 FAM231DQ6ZW35 169 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 ZNF329Q86UD4 541 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 BCL6BQ8N143 479 aaPredicted RBP6.82□□□□□ -1.32
VPS36-201ENST00000378060 C18orf32Q8TCD1 76 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 USF3Q68DE3 2245 aa6.82□□□□□ -1.32
VPS36-201ENST00000378060 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 THBDP07204 575 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 WNT2P09544 360 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
VPS36-201ENST00000378060 ZNF138P52744 262 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 LINC00205P59089 165 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 PAX8Q06710 450 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 C5orf64Q2M2E5 130 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 ZNF672Q499Z4 452 aaPredicted RBP6.81□□□□□ -1.32
VPS36-201ENST00000378060 FAM168AQ92567 244 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 C11orf52Q96A22 123 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 SNHG12Q9BXW3 62 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 IGHV3OR16-10A0A075B7F0 116 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 WT1P19544 449 aaPredicted RBP6.81□□□□□ -1.32
VPS36-201ENST00000378060 C10orf126Q8N4M7 172 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 YAE1D1Q9NRH1 226 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 A8MWV9 139 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 WISP1O95388 367 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 CD24P25063 80 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 KLF17Q5JT82 389 aaPredicted RBP6.81□□□□□ -1.32
VPS36-201ENST00000378060 C9orf139Q6ZV77 190 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 DUX3Q96PT4 197 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 MED13Q9UHV7 2174 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 COX11Q9Y6N1 276 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 YLPM1P49750 1951 aaKnown RBP6.81□□□□□ -1.32
VPS36-201ENST00000378060 PSMB11A5LHX3 300 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 EVI2AP22794 236 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 CFHR2P36980 270 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 Q86TA4 180 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 CCL19Q99731 98 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 SPRY4Q9C004 299 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 C7orf69Q9H7B7 122 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 PROK2Q9HC23 129 aa6.81□□□□□ -1.32
VPS36-201ENST00000378060 MED13LQ71F56 2210 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGKV2-40A0A087WW87 121 aaPredicted RBP6.8□□□□□ -1.32
VPS36-201ENST00000378060 LYNX1G3V0Z9 82 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGKV2D-40P01614 121 aaPredicted RBP6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGKV1-16P04430 117 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 LYNX1P0DP58 116 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 PLA2G5P39877 138 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 RNF182Q8N6D2 247 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 TRAV8-2A0A0B4J237 113 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 TSPAN13O95857 204 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 IGHV3-11P01762 117 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 C15orf32Q32M92 178 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 JMJD8Q96S16 334 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 NPFFR1Q9GZQ6 430 aa6.8□□□□□ -1.32
VPS36-201ENST00000378060 A0A087X0K7 114 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms