RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 MEOX2P50222 304 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 SELENOTP62341 195 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 DEFB112Q30KQ8 113 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 NSUN5P1Q3KNT7 163 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 WFDC11Q8NEX6 87 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 F2Z2F3 143 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 CGB3P0DN86 165 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 CGB7P0DN87 165 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 SYNJ2BPP57105 145 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 TEX38Q6PEX7 206 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 PRSS3P2Q8NHM4 247 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 METTL26Q96S19 204 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 NDFIP1Q9BT67 221 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 GSN-AS1Q9NRJ2 163 aa6.41□□□□□ -1.38
CKAP2-203ENST00000378037 TRAV41A0A0B4J266 112 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 IGHV2-70DA0A0C4DH43 119 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 BMPR1BO00238 502 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 EVI2AP22794 236 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 C2orf83Q53S99 150 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 OR1P1Q8NH06 330 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 TBX15Q96SF7 602 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 ZNF257Q9Y2Q1 563 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 HIVEP1P15822 2718 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 IGHV3-73A0A0B4J1V6 119 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 CR1LQ2VPA4 569 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 C3orf36Q3SXR2 165 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 EIF4E3Q8N5X7 224 aaKnown RBP6.4□□□□□ -1.38
CKAP2-203ENST00000378037 MBD3L1Q8WWY6 194 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 PRORYQ9H606 182 aa6.4□□□□□ -1.38
CKAP2-203ENST00000378037 FAM181BA6NEQ2 426 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 AVPP01185 164 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 IGLV1-47P01700 117 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 DLX6P56179 175 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 PATE2Q6UY27 113 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 C8orf49Q96NF6 230 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 TXN2Q99757 166 aa6.4□□□□□ -1.39
CKAP2-203ENST00000378037 A0A1B0GV90 55 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 B4DSR2 109 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 FCER1GP30273 86 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 ADMP35318 185 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 SPANXN1Q5VSR9 72 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 PITPNC1Q9UKF7 332 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM250H0YL14 139 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 HOXA3O43365 443 aaPredicted RBP6.39□□□□□ -1.39
CKAP2-203ENST00000378037 APOHP02749 345 aaPredicted RBP6.39□□□□□ -1.39
CKAP2-203ENST00000378037 LCN12Q6JVE5 192 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 JKAMPQ9P055 326 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 TRAV12-2A0A075B6T6 113 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 M0R2Z0 102 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 APCSP02743 223 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 ZNF843Q8N446 348 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 DYNLRB2Q8TF09 96 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM18Q96B42 140 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 EPDR1Q9UM22 224 aa6.39□□□□□ -1.39
CKAP2-203ENST00000378037 ELOA3CA0A087WX78 387 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGKV1-17P01599 117 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGLV2-23P01705 113 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM78Q5T7P6 136 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 NUDT10Q8NFP7 164 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 OR4X2Q8NGF9 303 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 RNASEH2CQ8TDP1 164 aaKnown RBP6.38□□□□□ -1.39
CKAP2-203ENST00000378037 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 KCNS1Q96KK3 526 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 VPS13CQ709C8 3753 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGHV7-81A0A0B4J1V7 117 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 SERF1AO75920 110 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 RNASE4P34096 147 aaKnown RBP6.38□□□□□ -1.39
CKAP2-203ENST00000378037 DEFA6Q01524 100 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 AARDQ4LEZ3 155 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 BEND2Q8NDZ0 799 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 SLC25A2Q9BXI2 301 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGHV1-69DA0A0B4J2H0 117 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 FAM90A9PA6NNJ1 464 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 K7EN84 100 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGHV1-69P01742 117 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 GPX1P07203 203 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 IGLC1P0CG04 106 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 G0S2P27469 103 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 LMO4P61968 165 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 WIPF2Q8TF74 440 aaPredicted RBP6.38□□□□□ -1.39
CKAP2-203ENST00000378037 EEF1AKMT3Q96AZ1 226 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 KAAG1Q9UBP8 84 aa6.38□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM189A5PLL7 270 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 HIST1H1EP10412 219 aaKnown RBP6.37□□□□□ -1.39
CKAP2-203ENST00000378037 EDN2P20800 178 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 PAX8Q06710 450 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 PSMG4Q5JS54 123 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 ZNF562Q6V9R5 426 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 TSTD3H0UI37 97 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 RPL7P18124 248 aaKnown RBP6.37□□□□□ -1.39
CKAP2-203ENST00000378037 VGLL1Q99990 258 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 ZNF586Q9NXT0 402 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 BSNQ9UPA5 3926 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 IGKV3OR2-268A0A0C4DH90 116 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 FA2HQ7L5A8 372 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 ANAPC16Q96DE5 110 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 C11orf1Q9H5F2 150 aa6.37□□□□□ -1.39
CKAP2-203ENST00000378037 K7EIM0 57 aa6.36□□□□□ -1.39
CKAP2-203ENST00000378037 TCRAP04437 139 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms