RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 MBP02144 154 aa9.76□□□□□ -0.85
CKAP2-202ENST00000378034 RPL35AP18077 110 aaKnown RBP9.76□□□□□ -0.85
CKAP2-202ENST00000378034 ACTL10Q5JWF8 245 aa9.76□□□□□ -0.85
CKAP2-202ENST00000378034 FOXI2Q6ZQN5 318 aa9.76□□□□□ -0.85
CKAP2-202ENST00000378034 TRPT1Q86TN4 253 aaKnown RBP9.76□□□□□ -0.85
CKAP2-202ENST00000378034 CSTL1Q9H114 145 aa9.76□□□□□ -0.85
CKAP2-202ENST00000378034 TGP01266 2768 aa9.76□□□□□ -0.85
CKAP2-202ENST00000378034 TRAV8-2A0A0B4J237 113 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 KNCNA6PVL3 124 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 HIST1H1EP10412 219 aaKnown RBP9.75□□□□□ -0.85
CKAP2-202ENST00000378034 HLA-DRB4P13762 266 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 TAS2R45P59539 299 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 MORN3Q6PF18 240 aaPredicted RBP9.75□□□□□ -0.85
CKAP2-202ENST00000378034 Q6ZWC4 215 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 MIR17HGQ75NE6 70 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 FAM167A-AS1Q96KT0 104 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 ARPC5LQ9BPX5 153 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 SLC25A2Q9BXI2 301 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 SAV1Q9H4B6 383 aaPredicted RBP9.75□□□□□ -0.85
CKAP2-202ENST00000378034 ZNF331Q9NQX6 463 aaPredicted RBP9.75□□□□□ -0.85
CKAP2-202ENST00000378034 HLA-DRB4X5D2U9 266 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 H3BQ15 152 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 SPP1P10451 314 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 TMEM41BQ5BJD5 291 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 EBLN2Q6P2I7 272 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 SAT2Q96F10 170 aaPredicted RBP9.75□□□□□ -0.85
CKAP2-202ENST00000378034 C20orf173Q96LM9 149 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 OR51M1Q9H341 326 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 CYTL1Q9NRR1 136 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 U3KQK5 164 aa9.75□□□□□ -0.85
CKAP2-202ENST00000378034 A0A1W2PPV4 95 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 H3BMM0 161 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 PDE6HQ13956 83 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 KHDC3LQ587J8 217 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 OR10G4Q8NGN3 311 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 OR10G9Q8NGN4 311 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 OR10G7Q8NGN6 311 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 RFNGQ9Y644 331 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 COL7A1Q02388 2944 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 TRBV19A0A075B6N1 114 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 KANTRA0A1W2PQU2 76 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 C1QBP02746 253 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 NUTF2P61970 127 aaKnown RBP9.74□□□□□ -0.85
CKAP2-202ENST00000378034 PSG3Q16557 428 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 PAXXQ9BUH6 204 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 ZNF586Q9NXT0 402 aa9.74□□□□□ -0.85
CKAP2-202ENST00000378034 A0A0J9YX75 114 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 PYYP10082 97 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 RAB2AP61019 212 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 PSG9Q00887 426 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 RNF182Q8N6D2 247 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 HYLS1Q96M11 299 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 RCHY1Q96PM5 261 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 SH3BGRL3Q9H299 93 aa9.73□□□□□ -0.85
CKAP2-202ENST00000378034 BCL2L11O43521 198 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 OR7C2O60412 319 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
CKAP2-202ENST00000378034 EIF5AP63241 154 aaKnown RBP9.72□□□□□ -0.85
CKAP2-202ENST00000378034 IGFL4Q6B9Z1 124 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 PQLC2Q6ZP29 291 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 ZNF738Q8NE65 137 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 RNF141Q8WVD5 230 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 SLC17A3O00476 420 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 NBEAP1P0C6P0 100 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 GDF5OSQ5U4N7 250 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 FAM122CQ6P4D5 195 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 TMUB2Q71RG4 321 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 PRELID1Q9Y255 219 aa9.72□□□□□ -0.85
CKAP2-202ENST00000378034 A8MTW9 85 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 SPRY2O43597 315 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 CA1P00915 261 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-202ENST00000378034 SNRPCP09234 159 aaKnown RBP9.71□□□□□ -0.86
CKAP2-202ENST00000378034 CDC34P49427 236 aaPredicted RBP9.71□□□□□ -0.86
CKAP2-202ENST00000378034 RPP25LQ8N5L8 163 aaKnown RBP9.71□□□□□ -0.86
CKAP2-202ENST00000378034 RNF183Q96D59 192 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 FXYD5Q96DB9 178 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 MRPL53Q96EL3 112 aaKnown RBP9.71□□□□□ -0.86
CKAP2-202ENST00000378034 C1QTNF4Q9BXJ3 329 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 AGRNO00468 2067 aa9.71□□□□□ -0.86
CKAP2-202ENST00000378034 H3BTX0 84 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 NDUFB4O95168 129 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 RPUSD4Q96CM3 377 aaKnown RBP9.7□□□□□ -0.86
CKAP2-202ENST00000378034 ZNF503Q96F45 646 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 OVOL2Q9BRP0 275 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 ACTR3CQ9C0K3 210 aaPredicted RBP9.7□□□□□ -0.86
CKAP2-202ENST00000378034 AAMDCQ9H7C9 122 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 DNAH9Q9NYC9 4486 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 F6UB75 175 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 OR10J4P0C629 311 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 HLA-DMBP28068 263 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 DEFB1P60022 68 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 UBE2L3P68036 154 aaKnown RBP9.7□□□□□ -0.86
CKAP2-202ENST00000378034 DEFB135Q30KP9 77 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 AKR1C8PQ5T2L2 129 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 LYPD1Q8N2G4 141 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 OR4B1Q8NGF8 309 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 OR8A1Q8NGG7 326 aa9.7□□□□□ -0.86
CKAP2-202ENST00000378034 BLNKQ8WV28 456 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms