RNA–Protein interactions for RNA: ENST00000377625.6

TBC1D4-201, Transcript of TBC1 domain family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TBC1D4, Length 6,182 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4-201ENST00000377625 FAM90A2PQ658T7 463 aa15.4■□□□□ 0.06
TBC1D4-201ENST00000377625 TMEM256Q8N2U0 113 aa15.4■□□□□ 0.06
TBC1D4-201ENST00000377625 SHANK2-AS3Q9BTD1 123 aa15.4■□□□□ 0.06
TBC1D4-201ENST00000377625 AMN1Q8IY45 258 aa15.4■□□□□ 0.06
TBC1D4-201ENST00000377625 SP5Q6BEB4 398 aaPredicted RBP15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 MSMBP08118 114 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 Q86TA4 180 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 LIME1Q9H400 295 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 LEPROTO15243 131 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 HIST1H4AP62805 103 aaKnown RBP15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 FOXL2NBQ6ZUU3 175 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 MSRB2Q9Y3D2 182 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 MYMXA0A1B0GTQ4 84 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 A6NNC1 897 aa15.39■□□□□ 0.05
TBC1D4-201ENST00000377625 TIMM21Q9BVV7 248 aa15.38■□□□□ 0.05
TBC1D4-201ENST00000377625 PRIMA1Q86XR5 153 aa15.38■□□□□ 0.05
TBC1D4-201ENST00000377625 SPXQ9BT56 116 aa15.38■□□□□ 0.05
TBC1D4-201ENST00000377625 A0A1W2PPI3 338 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 FNDC10F2Z333 226 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 PRR30Q53SZ7 412 aaPredicted RBP15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 LY6G5BQ8NDX9 201 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 A0A0G2JMZ2 1700 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 LRRC37A2A6NM11 1700 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 Q6ZRM9 215 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 ITGB1BP1O14713 200 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 C3orf79P0CE67 100 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 ZNRD1Q9P1U0 126 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 ARMS2P0C7Q2 107 aa15.37■□□□□ 0.05
TBC1D4-201ENST00000377625 ATP6V0E1O15342 81 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 ZNF562Q6V9R5 426 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 SYS1-DBNDD2H3BUS1 97 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 UBE2E1P51965 193 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 A0A087X0K7 114 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 IL17RELQ6ZVW7 336 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 GATA3P23771 443 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 PDE6HQ13956 83 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 ZC2HC1BQ5TFG8 222 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 C2orf82Q6UX34 121 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 DKK1O94907 266 aa15.36■□□□□ 0.05
TBC1D4-201ENST00000377625 MRPL27Q9P0M9 148 aaKnown RBP15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 MAPK1IP1LQ8NDC0 245 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 MED12Q93074 2177 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 POLEQ07864 2286 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 Q5PR19 223 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 C1orf194Q5T5A4 169 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 LINC00479Q96M42 142 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 FAM110DQ8TAY7 271 aaPredicted RBP15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 XCL2Q9UBD3 114 aa15.35■□□□□ 0.05
TBC1D4-201ENST00000377625 WNK3Q9BYP7 1800 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 TRPT1Q86TN4 253 aaKnown RBP15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 KNCNA6PVL3 124 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 K7ENP7 123 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 GAGE2BQ13066 116 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 GAGE2EQ4V326 116 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 GAGE2DQ9UEU5 116 aa15.34■□□□□ 0.05
TBC1D4-201ENST00000377625 MPDZO75970 2070 aa15.33■□□□□ 0.05
TBC1D4-201ENST00000377625 HS3ST6Q96QI5 342 aa15.33■□□□□ 0.04
TBC1D4-201ENST00000377625 OVOL2Q9BRP0 275 aa15.33■□□□□ 0.04
TBC1D4-201ENST00000377625 ACACAQ13085 2346 aa15.33■□□□□ 0.04
TBC1D4-201ENST00000377625 SSBP2P81877 361 aaPredicted RBP15.33■□□□□ 0.04
TBC1D4-201ENST00000377625 ZNF625Q96I27 306 aaPredicted RBP15.33■□□□□ 0.04
TBC1D4-201ENST00000377625 LINC01619G3V211 115 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 TNFRSF6BO95407 300 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 GFRA4Q9GZZ7 299 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 TRAV8-3A0A0A6YYJ7 113 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 IGHV1-69DA0A0B4J2H0 117 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 IGHV1-69P01742 117 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 ESDP10768 282 aa15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 DLX4Q92988 240 aaPredicted RBP15.32■□□□□ 0.04
TBC1D4-201ENST00000377625 NDUFB8O95169 186 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 MCRIP2Q9BUT9 160 aaKnown RBP15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 ANAPC10Q9UM13 185 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 ZNF48Q96MX3 618 aaPredicted RBP15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 CFHR3Q02985 330 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 SPINK13Q1W4C9 94 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 MPV17L2Q567V2 206 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 OCIAD2Q56VL3 154 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 VWC2LB2RUY7 222 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 MYO7BQ6PIF6 2116 aa15.31■□□□□ 0.04
TBC1D4-201ENST00000377625 GAGE12JA6NER3 117 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 F5H768 121 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 LYL1P12980 280 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 GAGE1Q13065 139 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 GAGE4Q13068 117 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 GAGE5Q13069 117 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 REG4Q9BYZ8 158 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 TMEM75Q8N9X5 138 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 COL6A6A6NMZ7 2263 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 Q96MF0 132 aa15.3■□□□□ 0.04
TBC1D4-201ENST00000377625 DAD1P61803 113 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 ZFAND6Q6FIF0 208 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 DNAJC30Q96LL9 226 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 LRRK1Q38SD2 2015 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 IGKV1-6A0A0C4DH72 117 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 YPEL3P61236 119 aaPredicted RBP15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 KLF12Q9Y4X4 402 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 ABCA1O95477 2261 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 G3V318 75 aa15.29■□□□□ 0.04
TBC1D4-201ENST00000377625 RHODO00212 210 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms