RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 FLNCQ14315 2725 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 TM4SF5O14894 197 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 RNASE2P10153 161 aaKnown RBP9.81□□□□□ -0.84
SF1-204ENST00000377390 MZT1Q08AG7 82 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 ASCL5Q7RTU5 278 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 FAM222BQ8WU58 562 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 MRPL20Q9BYC9 149 aaKnown RBP9.81□□□□□ -0.84
SF1-204ENST00000377390 RAB9BQ9NP90 201 aa9.81□□□□□ -0.84
SF1-204ENST00000377390 A0A1W2PPM0 123 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 H3BMG7 143 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 COX8AP10176 69 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 BCL6BQ8N143 479 aaPredicted RBP9.8□□□□□ -0.84
SF1-204ENST00000377390 Q9H3A6 140 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 NAV2Q8IVL1 2488 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 ARMS2P0C7Q2 107 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 CT45A10P0DMU9 189 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 CCL3L1P16619 93 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 GTSF1Q8WW33 167 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 CHCHD1Q96BP2 118 aaKnown RBP9.8□□□□□ -0.84
SF1-204ENST00000377390 S4R3C0 116 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 COL5A1P20908 1838 aaPredicted RBP9.8□□□□□ -0.84
SF1-204ENST00000377390 KBTBD11-OT1A0A1B0GTJ5 212 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 IFI27P40305 119 aaPredicted RBP9.8□□□□□ -0.84
SF1-204ENST00000377390 LOXL3P58215 753 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 RPS20P60866 119 aaKnown RBP9.8□□□□□ -0.84
SF1-204ENST00000377390 RIGQ13278 110 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
SF1-204ENST00000377390 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 E7EUB6 86 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 FAM167A-AS1Q96KT0 104 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 SS18L2Q9UHA2 77 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 FAM90A9PA6NNJ1 464 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 H3BRM9 83 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 F2RL2O00254 374 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 TGFAP01135 160 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 MC5RP33032 325 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 CFHR2P36980 270 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 NEU4Q8WWR8 484 aaPredicted RBP9.79□□□□□ -0.84
SF1-204ENST00000377390 RASL11AQ6T310 242 aa9.79□□□□□ -0.84
SF1-204ENST00000377390 TNFAIP6P98066 277 aaPredicted RBP9.78□□□□□ -0.84
SF1-204ENST00000377390 KLF5Q13887 457 aaPredicted RBP9.78□□□□□ -0.84
SF1-204ENST00000377390 LY6DQ14210 128 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 OR5A1Q8NGJ0 315 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 MBD6Q96DN6 1003 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 SORL1Q92673 2214 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 SMKR1H3BMG3 65 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 FAM106CPP0CH98 169 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 CD300EQ496F6 205 aaPredicted RBP9.78□□□□□ -0.84
SF1-204ENST00000377390 FAM106AQ4KMX7 169 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 PATE2Q6UY27 113 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 ATP5L2Q7Z4Y8 100 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 PRR7Q8TB68 274 aa9.78□□□□□ -0.84
SF1-204ENST00000377390 MRPL36Q9P0J6 103 aaKnown RBP9.78□□□□□ -0.84
SF1-204ENST00000377390 LINC01560Q8TB33 94 aa9.77□□□□□ -0.84
SF1-204ENST00000377390 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.84
SF1-204ENST00000377390 DYNLRB1Q9NP97 96 aa9.77□□□□□ -0.84
SF1-204ENST00000377390 SRRM5B3KS81 715 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 OR2J3O76001 311 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 CNIH1O95406 144 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 C2orf83Q53S99 150 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 TCRBV4S1A1TA0A5B7 111 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 C2orf91Q6ZV80 131 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 FXYD5Q96DB9 178 aa9.77□□□□□ -0.85
SF1-204ENST00000377390 CKS2P33552 79 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 Q6ZT83 130 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 ZNF418Q8TF45 676 aaPredicted RBP9.76□□□□□ -0.85
SF1-204ENST00000377390 WIPF2Q8TF74 440 aaPredicted RBP9.76□□□□□ -0.85
SF1-204ENST00000377390 D6R8Y8 96 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 TCRAP04437 139 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 FAM231DQ6ZW35 169 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 COL25A1Q9BXS0 654 aaPredicted RBP9.76□□□□□ -0.85
SF1-204ENST00000377390 RNF7Q9UBF6 113 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 RAXQ9Y2V3 346 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 DCHS2Q6V1P9 2916 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 TNFRSF1AP19438 455 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 WT1-ASQ06250 92 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 DIAPH2-AS1Q14236 149 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 C17orf58Q2M2W7 97 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 CACNG8Q8WXS5 425 aa9.76□□□□□ -0.85
SF1-204ENST00000377390 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 H3BVH4 76 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 PRRG2O14669 202 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 LOXL1Q08397 574 aaPredicted RBP9.75□□□□□ -0.85
SF1-204ENST00000377390 C22orf34Q6ZV56 151 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 ARL17AQ8IVW1 177 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 DSCAMO60469 2012 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 AGRNO00468 2067 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 CELSR1Q9NYQ6 3014 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 M0R3E3 92 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 SCGB2A1O75556 95 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 INSL3P51460 131 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 PLA2G2CQ5R387 149 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 CCDC144NLQ6NUI1 221 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 Q71RC1 249 aaPredicted RBP9.75□□□□□ -0.85
SF1-204ENST00000377390 FAM90A1Q86YD7 464 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 AMN1Q8IY45 258 aa9.75□□□□□ -0.85
SF1-204ENST00000377390 FLNBO75369 2602 aaKnown RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms