RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 DNAL4O96015 105 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 PRDM13Q9H4Q3 707 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 NDUFB8O95169 186 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 YPEL3P61236 119 aaPredicted RBP14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 FOXL1Q12952 345 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 BDP1A6H8Y1 2624 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 RCHY1Q96PM5 261 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 CHCHD5Q9BSY4 110 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 SHISA9B4DS77 424 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 NRN1Q9NPD7 142 aa14.42□□□□□ -0.1
CLSTN1-202ENST00000377298 ACTL10Q5JWF8 245 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 AMBPP02760 352 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 SYNJ2BPP57105 145 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 CNTFRP26992 372 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 PRADC1Q9BSG0 188 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 SPRY4Q9C004 299 aa14.41□□□□□ -0.1
CLSTN1-202ENST00000377298 NOTCH3Q9UM47 2321 aa14.4□□□□□ -0.1
CLSTN1-202ENST00000377298 RASL11AQ6T310 242 aa14.4□□□□□ -0.1
CLSTN1-202ENST00000377298 PYY3Q5JQD4 70 aa14.4□□□□□ -0.1
CLSTN1-202ENST00000377298 Q71RC1 249 aaPredicted RBP14.4□□□□□ -0.1
CLSTN1-202ENST00000377298 A0A087WX48 190 aa14.39□□□□□ -0.11
CLSTN1-202ENST00000377298 CHCHD1Q96BP2 118 aaKnown RBP14.39□□□□□ -0.11
CLSTN1-202ENST00000377298 DERL1Q9BUN8 251 aa14.39□□□□□ -0.11
CLSTN1-202ENST00000377298 TECTAO75443 2155 aa14.39□□□□□ -0.11
CLSTN1-202ENST00000377298 LAMTOR2Q9Y2Q5 125 aa14.39□□□□□ -0.11
CLSTN1-202ENST00000377298 TRAV12-3A0A0B4J271 114 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 NDUFA3O95167 84 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 INSP01308 110 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 GZMBP10144 247 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 MST1LQ2TV78 715 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 C1orf122Q6ZSJ8 110 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 DMRTC2Q8IXT2 367 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 Q8TAT8 98 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.38□□□□□ -0.111e-8■■■□□ 16.4
CLSTN1-202ENST00000377298 SH2D1AO60880 128 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 Q8NFD4 153 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 DKK4Q9UBT3 224 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 SMIM13P0DJ93 91 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 PRB4P10163 310 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 LYZL1Q6UWQ5 148 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 PRO3102Q9H379 93 aa14.38□□□□□ -0.11
CLSTN1-202ENST00000377298 EVI2AP22794 236 aa14.37□□□□□ -0.11
CLSTN1-202ENST00000377298 GTF3C1Q12789 2109 aa14.37□□□□□ -0.11
CLSTN1-202ENST00000377298 G3V318 75 aa14.37□□□□□ -0.11
CLSTN1-202ENST00000377298 GRNP28799 593 aaKnown RBP14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 ST6GALNAC6Q969X2 333 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 MMP23AO75900 390 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 ZNF124Q15973 351 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 LIME1Q9H400 295 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 LINC01619G3V211 115 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 CD28P10747 220 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 LINC01559Q495D7 138 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 JKAMPQ9P055 326 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 LTBP2Q14767 1821 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 TRGV1A0A0A0MS02 117 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 SCGB1A1P11684 91 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 IGFL4Q6B9Z1 124 aa14.36□□□□□ -0.11
CLSTN1-202ENST00000377298 IGHV2-70P01814 119 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 RPL36AP83881 106 aaKnown RBP14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 NIT1Q86X76 327 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 C8orf31Q8N9H6 132 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 RPL36ALQ969Q0 106 aaKnown RBP14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 DPH3P1Q9H4G8 78 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 TRAV8-1A0A0A6YYK1 113 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 IGKV3D-20A0A0C4DH25 116 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 A0A1W2PNU3 283 aaPredicted RBP14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 C9JQL5 133 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 IGKV1-39P01597 117 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 IGHV2-5P01817 119 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 IGKV1D-39P04432 117 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 ZNF134P52741 427 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 DPM2O94777 84 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 C1orf194Q5T5A4 169 aa14.35□□□□□ -0.11
CLSTN1-202ENST00000377298 ADARB2-AS1A8MUL3 147 aa14.34□□□□□ -0.11
CLSTN1-202ENST00000377298 ZGRF1Q86YA3 2104 aa14.34□□□□□ -0.11
CLSTN1-202ENST00000377298 PLXND1Q9Y4D7 1925 aa14.34□□□□□ -0.11
CLSTN1-202ENST00000377298 DEFB131AP59861 70 aa14.33□□□□□ -0.11
CLSTN1-202ENST00000377298 Q86TA4 180 aa14.33□□□□□ -0.11
CLSTN1-202ENST00000377298 UBE2E2Q96LR5 201 aa14.33□□□□□ -0.11
CLSTN1-202ENST00000377298 C11orf53Q8IXP5 236 aa14.33□□□□□ -0.12
CLSTN1-202ENST00000377298 IFI27L1Q96BM0 104 aa14.33□□□□□ -0.12
CLSTN1-202ENST00000377298 PAX9P55771 341 aa14.33□□□□□ -0.12
CLSTN1-202ENST00000377298 C22orf46C9J442 243 aa14.33□□□□□ -0.12
CLSTN1-202ENST00000377298 LAGE3Q14657 143 aa14.33□□□□□ -0.12
CLSTN1-202ENST00000377298 DENND4CQ5VZ89 1909 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 KLF2Q9Y5W3 355 aaPredicted RBP14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 RIPPLY3P57055 190 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 POU2AF1Q16633 256 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 YLPM1P49750 1951 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 FXYD7P58549 80 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 MRPL16Q9NX20 251 aaKnown RBP14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 D6R8Y8 96 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 NDUFA4O00483 81 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 FAM208BQ5VWN6 2430 aa14.32□□□□□ -0.12
CLSTN1-202ENST00000377298 TRBV7-9A0A0J9YWB2 115 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 SNAI2O43623 268 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 PSCAO43653 123 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 WT1-ASQ06250 92 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 ZNF876PQ49A33 203 aa14.31□□□□□ -0.12
CLSTN1-202ENST00000377298 NUP35Q8NFH5 326 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 240.7 ms