RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 NPBQ8NG41 125 aa11.46□□□□□ -0.58
MSH5-201ENST00000375703 OR11H6Q8NGC7 330 aa11.46□□□□□ -0.58
MSH5-201ENST00000375703 M0R3E3 92 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 MRPS12O15235 138 aaKnown RBP11.45□□□□□ -0.58
MSH5-201ENST00000375703 LY6HO94772 140 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 CEACAM3P40198 252 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 GVINP1Q7Z2Y8 2422 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 CFHR4Q92496 578 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 TMEM191AQ9H0A3 160 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 ST20Q9HBF5 79 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 hDV102S1A0JD36 115 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 BCL6BQ8N143 479 aaPredicted RBP11.45□□□□□ -0.58
MSH5-201ENST00000375703 ORAOV1Q8WV07 137 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 RAB1BQ9H0U4 201 aa11.45□□□□□ -0.58
MSH5-201ENST00000375703 NDUFA3O95167 84 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 CLEC2AQ6UVW9 174 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 UNQ5815/PRO19632Q6UWF5 114 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 S100A7AQ86SG5 101 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 RNASE8Q8TDE3 154 aaKnown RBP11.44□□□□□ -0.58
MSH5-201ENST00000375703 NEU4Q8WWR8 484 aaPredicted RBP11.44□□□□□ -0.58
MSH5-201ENST00000375703 HSPB8Q9UJY1 196 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 TIMM8BQ9Y5J9 83 aaPredicted RBP11.44□□□□□ -0.58
MSH5-201ENST00000375703 A0A1W2PRD5 423 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 A0A1W2PRF3 423 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 A0A1W2PRM7 423 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 MFAP4P55083 255 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 KLRD1Q13241 179 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 PET117Q6UWS5 81 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 AAMDCQ9H7C9 122 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 A0A1B0GW15 77 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 HSBP1L1C9JCN9 74 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 H0Y8G0 127 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 K7ENP7 123 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 C5orf64Q2M2E5 130 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 C8orf49Q96NF6 230 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 FANCD2OSQ96PS1 177 aa11.44□□□□□ -0.58
MSH5-201ENST00000375703 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 RBX1P62877 108 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 Q6ZVH6 145 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 MCRIP2Q9BUT9 160 aaKnown RBP11.43□□□□□ -0.58
MSH5-201ENST00000375703 FOXC1Q12948 553 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 PRSS3P2Q8NHM4 247 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 TIMD4Q96H15 378 aa11.43□□□□□ -0.58
MSH5-201ENST00000375703 LOC105371242A0A075B767 164 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 NBL1P41271 181 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 CSN1S1P47710 185 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 PDE6HQ13956 83 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 FBLN7Q53RD9 439 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 Q6AWC8 147 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 GATD1Q8NB37 220 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 ZNF738Q8NE65 137 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 AP5S1Q9NUS5 200 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 COX11Q9Y6N1 276 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 PTTG1IPP53801 180 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 ZNF562Q6V9R5 426 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 TP73-AS1Q9UF72 201 aa11.42□□□□□ -0.58
MSH5-201ENST00000375703 SERTM2A0A1B0GWG4 89 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 NCBP2LA6PVI3 153 aaKnown RBP11.41□□□□□ -0.58
MSH5-201ENST00000375703 NPIPB5A8MRT5 1133 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 SLC25A34Q6PIV7 304 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 M0R1W7 72 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 PRTN3P24158 256 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 FBXL19-AS1Q494R0 122 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 FA2HQ7L5A8 372 aa11.41□□□□□ -0.58
MSH5-201ENST00000375703 TMSB15BA0A087X1C1 80 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 TMEM189A5PLL7 270 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 S100A7P31151 101 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 LYZL1Q6UWQ5 148 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 ARPC1AQ92747 370 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 TPRP12270 2363 aaKnown RBP11.4□□□□□ -0.58
MSH5-201ENST00000375703 ODF3BA8MYP8 253 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 CCL21O00585 134 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 CCL25O15444 150 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 PSG9Q00887 426 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 MPV17L2Q567V2 206 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 TTC9CQ8N5M4 171 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 ZNF48Q96MX3 618 aaPredicted RBP11.4□□□□□ -0.58
MSH5-201ENST00000375703 PMCHL2Q9BQD1 86 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.58
MSH5-201ENST00000375703 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
MSH5-201ENST00000375703 IGHV3-23P01764 117 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 ZNF493Q6ZR52 646 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 TACC2O95359 2948 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 OR10AG1Q8NH19 301 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 ZNF747Q9BV97 191 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 MS4A6AQ9H2W1 248 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 THYN1Q9P016 225 aa11.39□□□□□ -0.59
MSH5-201ENST00000375703 SH2D1AO60880 128 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 NUDT3O95989 172 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 LINC01545Q5VT33 79 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 SCRT2Q9NQ03 307 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 ARHGAP32A7KAX9 2087 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 IFI27P40305 119 aaPredicted RBP11.38□□□□□ -0.59
MSH5-201ENST00000375703 NDPQ00604 133 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 RNF151Q2KHN1 245 aa11.38□□□□□ -0.59
MSH5-201ENST00000375703 IGKV2-40A0A087WW87 121 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms