RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR5AU1Q8NGC0 362 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 OR8B3Q8NGG8 313 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 LINC01560Q8TB33 94 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 RNASE8Q8TDE3 154 aaKnown RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 FXYD5Q96DB9 178 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 OR8B2Q96RD0 313 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 TRGV9Q99603 122 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 DNAJC4Q9NNZ3 241 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 ZNF355PQ9NSJ1 428 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 MRPL36Q9P0J6 103 aaKnown RBP3.75□□□□□ -1.81
USP48-202ENST00000374730 SIGLEC9Q9Y336 463 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 V9GYV3 84 aa3.75□□□□□ -1.81
USP48-202ENST00000374730 ABCA4P78363 2273 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PPIAL4CA0A0B4J2A2 164 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 M0R1W7 72 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 CCL21O00585 134 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 IGLV2-8P01709 118 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 MT-ND6P03923 174 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 LIPFP07098 398 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PPIAL4GP0DN37 164 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 ESDP10768 282 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 COL8A2P25067 703 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 MYCNOSP40205 109 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 MFAP2P55001 183 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 ZNF90Q03938 601 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 TNXAQ16473 311 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 RPEL1Q2QD12 228 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 TIGITQ495A1 244 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PDZD11Q5EBL8 140 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 C11orf71Q6IPW1 123 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PATE2Q6UY27 113 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 FAM231DQ6ZW35 169 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PPP1R27Q86WC6 154 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 GBGT1Q8N5D6 347 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 OR11H6Q8NGC7 330 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 RPEQ96AT9 228 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 SMIM12Q96EX1 92 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 TIMD4Q96H15 378 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 PAXXQ9BUH6 204 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 RAB1BQ9H0U4 201 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 TNFRSF19Q9NS68 423 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 CBLN4Q9NTU7 201 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 C1RLQ9NZP8 487 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 INSIG2Q9Y5U4 225 aa3.74□□□□□ -1.81
USP48-202ENST00000374730 F11RQ9Y624 299 aaKnown RBP3.74□□□□□ -1.81
USP48-202ENST00000374730 TEP1Q99973 2627 aaKnown RBP3.73□□□□□ -1.81
USP48-202ENST00000374730 IGHV3-72A0A0B4J1Y9 119 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 TRAV5A0A0B4J249 113 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 SMIM27A0A1W2PRY6 76 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 ODF3BA8MYP8 253 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 LYNX1G3V0Z9 82 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 SLC17A3O00476 420 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 PEX7O00628 323 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 ENSAO43768 121 aaKnown RBP3.73□□□□□ -1.81
USP48-202ENST00000374730 HYPMO75409 117 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 NDUFA3O95167 84 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 MOSP00540 346 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 LYNX1P0DP58 116 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 GZMBP10144 247 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 PAX1P15863 534 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 HNF1AP20823 631 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 COX7A1P24310 79 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 CNTFRP26992 372 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 PKIAP61925 76 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 CX3CL1P78423 397 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 Q0VG73 95 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 OR5I1Q13606 314 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 LBHQ53QV2 105 aaPredicted RBP3.73□□□□□ -1.81
USP48-202ENST00000374730 IBA57Q5T440 356 aaKnown RBP3.73□□□□□ -1.81
USP48-202ENST00000374730 TPTE2P1Q5T6R2 138 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 RASL11AQ6T310 242 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 LINC00305Q7Z4B0 112 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 KIR3DL3Q8N743 410 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 OR1L6Q8NGR2 347 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 SRSF12Q8WXF0 261 aaKnown RBP3.73□□□□□ -1.81
USP48-202ENST00000374730 CHRDL1Q9BU40 450 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 GNB1LQ9BYB4 327 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 TMEM14CQ9P0S9 112 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 HIVEP3Q5T1R4 2406 aa3.73□□□□□ -1.81
USP48-202ENST00000374730 ITPR1Q14643 2758 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 TRBV6-1A0A0K0K1D8 114 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 A0A1W2PS18 150 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 OOSP1A8MZH6 123 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 SNURFLB1AK76 121 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 TSTD3H0UI37 97 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 I3L2K1 104 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 NBR2O15453 112 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 GATCO43716 136 aaKnown RBP3.72□□□□□ -1.81
USP48-202ENST00000374730 HLA-DQA1P01909 254 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 REG1AP05451 166 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 IGLC1P0CG04 106 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 PYYP10082 97 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 GP9P14770 177 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 CBLN1P23435 193 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 PRTN3P24158 256 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 HTR1DP28221 377 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 CEACAM3P40198 252 aa3.72□□□□□ -1.81
USP48-202ENST00000374730 SEC61BP60468 96 aaKnown RBP3.72□□□□□ -1.81
USP48-202ENST00000374730 PAFAH1B2P68402 229 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms