RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 SLC50A1Q9BRV3 221 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 OR51M1Q9H341 326 aa11.13□□□□□ -0.63
HSPG2-201ENST00000374673 TRAV8-2A0A0B4J237 113 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 H3BQ15 152 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 ZNF253O75346 499 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 SEC11BP0C7V7 166 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 PYYP10082 97 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 TPT1P13693 172 aaKnown RBP11.12□□□□□ -0.63
HSPG2-201ENST00000374673 CDC34P49427 236 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-201ENST00000374673 ZNF124Q15973 351 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 BAP18Q8IXM2 172 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 RPP25LQ8N5L8 163 aaKnown RBP11.12□□□□□ -0.63
HSPG2-201ENST00000374673 SAT2Q96F10 170 aaPredicted RBP11.12□□□□□ -0.63
HSPG2-201ENST00000374673 RPRMQ9NS64 109 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 ZNF586Q9NXT0 402 aa11.12□□□□□ -0.63
HSPG2-201ENST00000374673 RBMY1BA6NDE4 496 aaKnown RBP11.11□□□□□ -0.63
HSPG2-201ENST00000374673 RBMY1EA6NEQ0 496 aaKnown RBP11.11□□□□□ -0.63
HSPG2-201ENST00000374673 OR7C2O60412 319 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 RBMY1DP0C7P1 496 aaKnown RBP11.11□□□□□ -0.63
HSPG2-201ENST00000374673 C4BPBP20851 252 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 PDE6HQ13956 83 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 AKR1C8PQ5T2L2 129 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 PQLC2Q6ZP29 291 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 LRRC20Q8TCA0 184 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 LINC00052Q96N35 136 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 PAXXQ9BUH6 204 aa11.11□□□□□ -0.63
HSPG2-201ENST00000374673 ZNF331Q9NQX6 463 aaPredicted RBP11.11□□□□□ -0.63
HSPG2-201ENST00000374673 MEGF8Q7Z7M0 2845 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 TRBV19A0A075B6N1 114 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-201ENST00000374673 SLC17A3O00476 420 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 SNRPCP09234 159 aaKnown RBP11.1□□□□□ -0.63
HSPG2-201ENST00000374673 STAG3L2P0CL84 134 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 STAG3L3P0CL85 134 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 SLC51BQ86UW2 128 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 RNF141Q8WVD5 230 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 RAB24Q969Q5 203 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 FXYD5Q96DB9 178 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 C20orf173Q96LM9 149 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 ACTR3CQ9C0K3 210 aaPredicted RBP11.1□□□□□ -0.63
HSPG2-201ENST00000374673 CLEC5AQ9NY25 188 aa11.1□□□□□ -0.63
HSPG2-201ENST00000374673 H3BTX0 84 aa11.09□□□□□ -0.63
HSPG2-201ENST00000374673 EIF3GO75821 320 aaKnown RBP eCLIP11.09□□□□□ -0.63
HSPG2-201ENST00000374673 OR10J4P0C629 311 aa11.09□□□□□ -0.63
HSPG2-201ENST00000374673 NBEAP1P0C6P0 100 aa11.09□□□□□ -0.63
HSPG2-201ENST00000374673 IGFL4Q6B9Z1 124 aa11.09□□□□□ -0.63
HSPG2-201ENST00000374673 FOXI2Q6ZQN5 318 aa11.09□□□□□ -0.63
HSPG2-201ENST00000374673 CTXND1A0A1B0GTU2 59 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 KNCNA6PVL3 124 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 UMAD1C9J7I0 102 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 NDUFB4O95168 129 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 UBE2L3P68036 154 aaKnown RBP11.08□□□□□ -0.64
HSPG2-201ENST00000374673 PSG9Q00887 426 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 ZNF726P1Q15940 193 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 PSG3Q16557 428 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 STHQ8IWL8 128 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 RNF182Q8N6D2 247 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 SAV1Q9H4B6 383 aaPredicted RBP11.08□□□□□ -0.64
HSPG2-201ENST00000374673 PLA2G2EQ9NZK7 142 aa11.08□□□□□ -0.64
HSPG2-201ENST00000374673 AGRNO00468 2067 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 HMGB3O15347 200 aaKnown RBP11.07□□□□□ -0.64
HSPG2-201ENST00000374673 ARL14EPLP0DKL9 152 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 HLA-DRB4P13762 266 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 HLA-DMBP28068 263 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 NKX2-5P52952 324 aaPredicted RBP11.07□□□□□ -0.64
HSPG2-201ENST00000374673 ACTL10Q5JWF8 245 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 EIF5AL1Q6IS14 154 aaKnown RBP11.07□□□□□ -0.64
HSPG2-201ENST00000374673 SSX7Q7RTT5 188 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 TRPT1Q86TN4 253 aaKnown RBP11.07□□□□□ -0.64
HSPG2-201ENST00000374673 BLNKQ8WV28 456 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 HLA-DRB4X5D2U9 266 aa11.07□□□□□ -0.64
HSPG2-201ENST00000374673 KIR2DL5BA0A0G2JN68 375 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 KIR2DL5BA0A0G2JPC4 375 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 A0A0J9YX75 114 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 H3BMM0 161 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 RPL35AP18077 110 aaKnown RBP11.06□□□□□ -0.64
HSPG2-201ENST00000374673 APOC4P55056 127 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 DEFB1P60022 68 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 HAGHQ16775 308 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 GDF5OSQ5U4N7 250 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 EBLN2Q6P2I7 272 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 SBSPONQ8IVN8 264 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 KIR2DL5AQ8N109 375 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 ZNF738Q8NE65 137 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 KIR2DL5BQ8NHK3 375 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 TMED6Q8WW62 240 aa11.06□□□□□ -0.64
HSPG2-201ENST00000374673 MRPL53Q96EL3 112 aaKnown RBP11.06□□□□□ -0.64
HSPG2-201ENST00000374673 F6UB75 175 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 CXorf1O96002 111 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 DPPA3Q6W0C5 159 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 LYPD1Q8N2G4 141 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 SUN5Q8TC36 379 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 PHYHIPLQ96FC7 376 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 CLUHP3Q96NS8 147 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 AAMDCQ9H7C9 122 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 PRELID1Q9Y255 219 aa11.05□□□□□ -0.64
HSPG2-201ENST00000374673 PRKDCP78527 4128 aaKnown RBP11.04□□□□□ -0.64
HSPG2-201ENST00000374673 GCHFRP30047 84 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms