RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
PFDN6-203ENST00000374610 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
PFDN6-203ENST00000374610 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
PFDN6-203ENST00000374610 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
PFDN6-203ENST00000374610 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
PFDN6-203ENST00000374610 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 PYYP10082 97 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
PFDN6-203ENST00000374610 SPP1P10451 314 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
PFDN6-203ENST00000374610 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
PFDN6-203ENST00000374610 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PFDN6-203ENST00000374610 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 CYTL1Q9NRR1 136 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 FBN3Q75N90 2809 aa11.3□□□□□ -0.6
PFDN6-203ENST00000374610 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 SOCS3O14543 225 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 OR10J4P0C629 311 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 PSG9Q00887 426 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 CD300CQ08708 224 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
PFDN6-203ENST00000374610 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
PFDN6-203ENST00000374610 H3BQ15 152 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
PFDN6-203ENST00000374610 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 HAGHQ16775 308 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 SBSPONQ8IVN8 264 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 ZNF586Q9NXT0 402 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 NOTCH1P46531 2555 aa11.28□□□□□ -0.6
PFDN6-203ENST00000374610 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
PFDN6-203ENST00000374610 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
PFDN6-203ENST00000374610 PSG3Q16557 428 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
PFDN6-203ENST00000374610 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 FOXI2Q6ZQN5 318 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 BAP18Q8IXM2 172 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 OR4B1Q8NGF8 309 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 ZNF331Q9NQX6 463 aaPredicted RBP11.27□□□□□ -0.61
PFDN6-203ENST00000374610 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.61
PFDN6-203ENST00000374610 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■□□□ 11.7
PFDN6-203ENST00000374610 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 PDE6HQ13956 83 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
PFDN6-203ENST00000374610 RAB24Q969Q5 203 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
PFDN6-203ENST00000374610 SAV1Q9H4B6 383 aaPredicted RBP11.26□□□□□ -0.61
PFDN6-203ENST00000374610 TRAV8-2A0A0B4J237 113 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 SLC17A3O00476 420 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 UBE2CO00762 179 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 ZNF253O75346 499 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
PFDN6-203ENST00000374610 CXorf1O96002 111 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 SLC51BQ86UW2 128 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
PFDN6-203ENST00000374610 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
PFDN6-203ENST00000374610 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 F6UB75 175 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 H3BMM0 161 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 CSN1S1P47710 185 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 DEFB1P60022 68 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 LINC00322Q6ZN03 302 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 SAT2Q96F10 170 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-203ENST00000374610 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
PFDN6-203ENST00000374610 DNAH3Q8TD57 4116 aa11.23□□□□□ -0.61
PFDN6-203ENST00000374610 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
PFDN6-203ENST00000374610 STAG3L3P0CL85 134 aa11.23□□□□□ -0.61
PFDN6-203ENST00000374610 NKX2-5P52952 324 aaPredicted RBP11.23□□□□□ -0.61
PFDN6-203ENST00000374610 ICAM4Q14773 271 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms