RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 OR51M1Q9H341 326 aa11.32□□□□□ -0.6
PFDN6-202ENST00000374607 H3BTX0 84 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 APOC4P55056 127 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 TMEM41BQ5BJD5 291 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 ACTL10Q5JWF8 245 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 EBLN2Q6P2I7 272 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 ZNF738Q8NE65 137 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 HRH4Q9H3N8 390 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
PFDN6-202ENST00000374607 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 PYYP10082 97 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 HIST1H1EP10412 219 aaKnown RBP11.3□□□□□ -0.6
PFDN6-202ENST00000374607 SPP1P10451 314 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 TPT1P13693 172 aaKnown RBP11.3□□□□□ -0.6
PFDN6-202ENST00000374607 CDC34P49427 236 aaPredicted RBP11.3□□□□□ -0.6
PFDN6-202ENST00000374607 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PFDN6-202ENST00000374607 ZMAT4Q9H898 229 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 CYTL1Q9NRR1 136 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
PFDN6-202ENST00000374607 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 SOCS3O14543 225 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 OR10J4P0C629 311 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 UBE2L3P68036 154 aaKnown RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 PSG9Q00887 426 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 CD300CQ08708 224 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
PFDN6-202ENST00000374607 IGFL4Q6B9Z1 124 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 RNF182Q8N6D2 247 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 RNF141Q8WVD5 230 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 C17orf77Q96MU5 243 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 CITED4Q96RK1 184 aa11.29□□□□□ -0.6
PFDN6-202ENST00000374607 H3BQ15 152 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 HMGB3O15347 200 aaKnown RBP11.28□□□□□ -0.6
PFDN6-202ENST00000374607 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 HAGHQ16775 308 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 SBSPONQ8IVN8 264 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 IQCF2Q8IXL9 164 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 AAMDCQ9H7C9 122 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 ZNF586Q9NXT0 402 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 CLEC5AQ9NY25 188 aa11.28□□□□□ -0.6
PFDN6-202ENST00000374607 TRBV19A0A075B6N1 114 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 NBEAP1P0C6P0 100 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
PFDN6-202ENST00000374607 NUTF2P61970 127 aaKnown RBP11.27□□□□□ -0.61
PFDN6-202ENST00000374607 PSG3Q16557 428 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 EIF5AL1Q6IS14 154 aaKnown RBP11.27□□□□□ -0.61
PFDN6-202ENST00000374607 PQLC2Q6ZP29 291 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 FOXI2Q6ZQN5 318 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 BAP18Q8IXM2 172 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 OR4B1Q8NGF8 309 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 FAM167A-AS1Q96KT0 104 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF331Q9NQX6 463 aaPredicted RBP11.27□□□□□ -0.61
PFDN6-202ENST00000374607 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.61
PFDN6-202ENST00000374607 EIF3GO75821 320 aaKnown RBP eCLIP11.26□□□□□ -0.614e-7■■□□□ 11.7
PFDN6-202ENST00000374607 IGKV3-20P01619 116 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 PDE6HQ13956 83 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
PFDN6-202ENST00000374607 RAB24Q969Q5 203 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 C20orf173Q96LM9 149 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 CSTL1Q9H114 145 aa11.26□□□□□ -0.61
PFDN6-202ENST00000374607 SAV1Q9H4B6 383 aaPredicted RBP11.26□□□□□ -0.61
PFDN6-202ENST00000374607 TRAV8-2A0A0B4J237 113 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 KIR2DL5BA0A0G2JN68 375 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 KIR2DL5BA0A0G2JPC4 375 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 SLC17A3O00476 420 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 UBE2CO00762 179 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 ZNF253O75346 499 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 DUSP14O95147 198 aaKnown RBP11.25□□□□□ -0.61
PFDN6-202ENST00000374607 CXorf1O96002 111 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 HLA-DMBP28068 263 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 SLC51BQ86UW2 128 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 KIR2DL5AQ8N109 375 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
PFDN6-202ENST00000374607 SPATA25Q9BR10 227 aa11.25□□□□□ -0.61
PFDN6-202ENST00000374607 CTXND1A0A1B0GTU2 59 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 UMAD1C9J7I0 102 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 F6UB75 175 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 H3BMM0 161 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 CA1P00915 261 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 ARL14EPLP0DKL9 152 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 HLA-DRB4P13762 266 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 CSN1S1P47710 185 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 DEFB1P60022 68 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 RANP62826 216 aaKnown RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 FAM74A1Q5RGS3 127 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 LINC00322Q6ZN03 302 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 SAT2Q96F10 170 aaPredicted RBP11.24□□□□□ -0.61
PFDN6-202ENST00000374607 PRELID1Q9Y255 219 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 HLA-DRB4X5D2U9 266 aa11.24□□□□□ -0.61
PFDN6-202ENST00000374607 STAG3L2P0CL84 134 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms