RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 RITA1Q96K30 269 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 DKK4Q9UBT3 224 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 APC2O95996 2303 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 A0A1W2PNU3 283 aaPredicted RBP10.29□□□□□ -0.76
PRPF4-201ENST00000374198 ZNF785A8K8V0 405 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 PRRG2O14669 202 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 IGHV3-48P01763 117 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 IGKV1-16P04430 117 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 PPIFP30405 207 aaKnown RBP10.29□□□□□ -0.76
PRPF4-201ENST00000374198 ERHP84090 104 aaKnown RBP10.29□□□□□ -0.76
PRPF4-201ENST00000374198 RRN3P1Q2M238 152 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 LCNL1Q6ZST4 164 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 TMEM178AQ8NBL3 297 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 KLF14Q8TD94 323 aaPredicted RBP10.29□□□□□ -0.76
PRPF4-201ENST00000374198 ZMAT4Q9H898 229 aa10.29□□□□□ -0.76
PRPF4-201ENST00000374198 IGLV2-11P01706 119 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 ORMDL3Q8N138 153 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 THAP8Q8NA92 274 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 C12orf49Q9H741 205 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 CALYQ9NYX4 217 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 COL27A1Q8IZC6 1860 aaPredicted RBP10.28□□□□□ -0.76
PRPF4-201ENST00000374198 FRYQ5TBA9 3013 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 FHL3Q13643 280 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 RND1Q92730 232 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 ANAPC13Q9BS18 74 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 TPPP3Q9BW30 176 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 NDUFA4L2Q9NRX3 87 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 EPG5Q9HCE0 2579 aa10.28□□□□□ -0.76
PRPF4-201ENST00000374198 GP9P14770 177 aa10.27□□□□□ -0.76
PRPF4-201ENST00000374198 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.76
PRPF4-201ENST00000374198 TNCP24821 2201 aa10.27□□□□□ -0.76
PRPF4-201ENST00000374198 URB1O60287 2271 aaKnown RBP10.27□□□□□ -0.77
PRPF4-201ENST00000374198 CCL4P13236 92 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 ODF1Q14990 250 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 TAL2Q16559 108 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 FAM104BQ5XKR9 115 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 Q6AWC8 147 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 Q6ZS92 163 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 DOCK7Q96N67 2140 aa10.27□□□□□ -0.77
PRPF4-201ENST00000374198 IGKV1D-17A0A075B6S4 117 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 TNFRSF13BO14836 293 aaPredicted RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 SAA1P0DJI8 122 aaPredicted RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 EVI2AP22794 236 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 MRPL36Q9P0J6 103 aaKnown RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 KLF17Q5JT82 389 aaPredicted RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 GOLT1AQ6ZVE7 132 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 GTSCR1Q86UQ5 136 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 NFE4Q86UQ8 179 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 ZCCHC24Q8N2G6 241 aaKnown RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 TANC2Q9HCD6 1990 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 IGKCP01834 107 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 HLA-DRB4P13762 266 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 Q0VFX4 171 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 C17orf58Q2M2W7 97 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 C8orf46Q8TAG6 207 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 PPP1R35Q8TAP8 253 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 OTORQ9NRC9 128 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 RALYQ9UKM9 306 aaKnown RBP10.26□□□□□ -0.77
PRPF4-201ENST00000374198 HLA-DRB4X5D2U9 266 aa10.26□□□□□ -0.77
PRPF4-201ENST00000374198 DYSFO75923 2080 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 CGB3P0DN86 165 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 CGB7P0DN87 165 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 MRPL51Q4U2R6 128 aaKnown RBP10.25□□□□□ -0.77
PRPF4-201ENST00000374198 CFAP126Q5VTH2 177 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 IGF2-ASQ6U949 168 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 GLMPQ8WWB7 406 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 B5MCH6 92 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 E7EUB6 86 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 INS-IGF2F8WCM5 200 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 CRYGCP07315 174 aa10.25□□□□□ -0.77
PRPF4-201ENST00000374198 HOXB4P17483 251 aaPredicted RBP10.25□□□□□ -0.77
PRPF4-201ENST00000374198 SMCPP49901 116 aaPredicted RBP10.25□□□□□ -0.77
PRPF4-201ENST00000374198 USP24Q9UPU5 2620 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 TRBV6-1A0A0K0K1D8 114 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 TMEM213A2RRL7 107 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 SPINK14Q6IE38 97 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 ZNRF1Q8ND25 227 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 FAM110AQ9BQ89 295 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 UFC1Q9Y3C8 167 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 CACNA1BQ00975 2339 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 SSUH2Q9Y2M2 353 aa10.24□□□□□ -0.77
PRPF4-201ENST00000374198 ANKRD11Q6UB99 2663 aaPredicted RBP10.23□□□□□ -0.77
PRPF4-201ENST00000374198 NPYP01303 97 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 FOLR3P41439 243 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 HERV-K104P63124 156 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 WT1-ASQ06250 92 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 FAM169BQ8N8A8 192 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 DOCK10Q96BY6 2186 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 TIMM8AO60220 97 aaPredicted RBP10.23□□□□□ -0.77
PRPF4-201ENST00000374198 PRSS1P07477 247 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 IL11RAQ14626 422 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 EXOC3-AS1Q8N2X6 119 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 HIST1H4GQ99525 98 aa10.23□□□□□ -0.77
PRPF4-201ENST00000374198 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
PRPF4-201ENST00000374198 CKS2P33552 79 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms