RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 FBLN7Q53RD9 439 aa13.18□□□□□ -0.3
PCIF1-201ENST00000372409 SRSF8Q9BRL6 282 aaKnown RBP13.18□□□□□ -0.3
PCIF1-201ENST00000372409 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 NDFIP1Q9BT67 221 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 RNF24Q9Y225 148 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 SYS1-DBNDD2H3BUS1 97 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 CCL21O00585 134 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 APOHP02749 345 aaPredicted RBP13.17□□□□□ -0.3
PCIF1-201ENST00000372409 HOXB4P17483 251 aaPredicted RBP13.17□□□□□ -0.3
PCIF1-201ENST00000372409 NBL1P41271 181 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 PSG3Q16557 428 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
PCIF1-201ENST00000372409 TP73-AS1Q9UF72 201 aa13.17□□□□□ -0.3
PCIF1-201ENST00000372409 NCBP2LA6PVI3 153 aaKnown RBP13.16□□□□□ -0.3
PCIF1-201ENST00000372409 IGHV3-23P01764 117 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 CEACAM3P40198 252 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 LY6G5BQ8NDX9 201 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 CFHR4Q92496 578 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 TIMD4Q96H15 378 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 RAB1BQ9H0U4 201 aa13.16□□□□□ -0.3
PCIF1-201ENST00000372409 HRNRQ86YZ3 2850 aaPredicted RBP13.15□□□□□ -0.3
PCIF1-201ENST00000372409 AKAP6Q13023 2319 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 hDV102S1A0JD36 115 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 C20orf202A1L168 122 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 RIGQ13278 110 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 C8orf49Q96NF6 230 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 TMUB1Q9BVT8 246 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 NCOR2Q9Y618 2525 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 TMSB15BA0A087X1C1 80 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 NDUFB8O95169 186 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 AAMDCQ9H7C9 122 aa13.15□□□□□ -0.3
PCIF1-201ENST00000372409 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
PCIF1-201ENST00000372409 LOC105371242A0A075B767 164 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 CRIP1P50238 77 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 Q6ZVH6 145 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 OR11H6Q8NGC7 330 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 CDSNQ15517 529 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 DMRTA1Q5VZB9 504 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 C16orf54Q6UWD8 224 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 LYPD1Q8N2G4 141 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
PCIF1-201ENST00000372409 TRBV6-1A0A0K0K1D8 114 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 MFAP4P55083 255 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 WI2-2373I1.2A0A1W2PRP0 233 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 NDUFA3O95167 84 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 UNQ5815/PRO19632Q6UWF5 114 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 NPBQ8NG41 125 aa13.13□□□□□ -0.31
PCIF1-201ENST00000372409 MRPS12O15235 138 aaKnown RBP13.12□□□□□ -0.31
PCIF1-201ENST00000372409 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
PCIF1-201ENST00000372409 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 FANCD2OSQ96PS1 177 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 TMEM191AQ9H0A3 160 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 TRAV30A0A087WSZ9 112 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 SERTM2A0A1B0GWG4 89 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 TCF21O43680 179 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 OVOL3O00110 214 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 CSN1S1P47710 185 aa13.12□□□□□ -0.31
PCIF1-201ENST00000372409 IGLV11-55A0A075B6I3 123 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 MUC21A0A0G2JKD1 596 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 MUC21A0A140T8X8 626 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 OR2T8A6NH00 312 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 HSBP1L1C9JCN9 74 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 NDPQ00604 133 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 MUC21Q5SSG8 566 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 S100A7AQ86SG5 101 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 PRSS3P2Q8NHM4 247 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 C21orf62Q9NYP8 219 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 WNK2Q9Y3S1 2297 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 IGHV3OR16-8A0A075B7F1 116 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 AP5S1Q9NUS5 200 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 HSPB8Q9UJY1 196 aa13.11□□□□□ -0.31
PCIF1-201ENST00000372409 SPTBN1Q01082 2364 aaKnown RBP13.1□□□□□ -0.31
PCIF1-201ENST00000372409 IGKV2-40A0A087WW87 121 aaPredicted RBP13.1□□□□□ -0.31
PCIF1-201ENST00000372409 IGKV2D-40P01614 121 aaPredicted RBP13.1□□□□□ -0.31
PCIF1-201ENST00000372409 PRTN3P24158 256 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 FA2HQ7L5A8 372 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 SPTAN1Q13813 2472 aaKnown RBP13.1□□□□□ -0.31
PCIF1-201ENST00000372409 IGHV3-35A0A0C4DH35 117 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 FBXL19-AS1Q494R0 122 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 ZNF562Q6V9R5 426 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 ST20Q9HBF5 79 aa13.1□□□□□ -0.31
PCIF1-201ENST00000372409 LOC389332A0A1B0GUA5 103 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 ODF3BA8MYP8 253 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 M0R1W7 72 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 IGFL4Q6B9Z1 124 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 LYZL1Q6UWQ5 148 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 NEU4Q8WWR8 484 aaPredicted RBP13.09□□□□□ -0.31
PCIF1-201ENST00000372409 C1RLQ9NZP8 487 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 NPIPB5A8MRT5 1133 aa13.09□□□□□ -0.31
PCIF1-201ENST00000372409 F8W735 103 aaPredicted RBP13.09□□□□□ -0.31
PCIF1-201ENST00000372409 VMO1Q7Z5L0 202 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms