RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PRSS57Q6UWY2 283 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 CHAC1Q9BUX1 264 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 RHPN1-AS1Q9BWJ2 59 aa19.37■□□□□ 0.69
RAPGEF1-203ENST00000372195 A0A1W2PPI3 338 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 SAA4P35542 130 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 ZC2HC1BQ5TFG8 222 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 MINOS1Q5TGZ0 78 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 IL17RELQ6ZVW7 336 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 MINOS1-NBL1R4GNA1 71 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 E7EQL1 145 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 LAMTOR3Q9UHA4 124 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 VCYO14598 125 aa19.36■□□□□ 0.69
RAPGEF1-203ENST00000372195 SIP14410 1827 aa19.35■□□□□ 0.69
RAPGEF1-203ENST00000372195 LRRK1Q38SD2 2015 aa19.35■□□□□ 0.69
RAPGEF1-203ENST00000372195 DLX4Q92988 240 aaPredicted RBP19.35■□□□□ 0.69
RAPGEF1-203ENST00000372195 IGHV3-16A0A0C4DH30 117 aa19.35■□□□□ 0.69
RAPGEF1-203ENST00000372195 SYNJ2BPP57105 145 aa19.35■□□□□ 0.69
RAPGEF1-203ENST00000372195 MSRB2Q9Y3D2 182 aa19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 OVOL3O00110 214 aa19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 RPL36AP83881 106 aaKnown RBP19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 ZNF562Q6V9R5 426 aa19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 C9orf139Q6ZV77 190 aa19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 RPL36ALQ969Q0 106 aaKnown RBP19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 TRAV26-2A0A0B4J265 109 aa19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.34■□□□□ 0.69
RAPGEF1-203ENST00000372195 VWA8A3KMH1 1905 aa19.33■□□□□ 0.69
RAPGEF1-203ENST00000372195 MAJINQ3KP22 176 aa19.33■□□□□ 0.69
RAPGEF1-203ENST00000372195 SSBP2P81877 361 aaPredicted RBP19.33■□□□□ 0.69
RAPGEF1-203ENST00000372195 AHCTF1Q8WYP5 2266 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 APC2O95996 2303 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 KLK9Q9UKQ9 250 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 PLEKHB2Q96CS7 222 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 SBF1O95248 1867 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 M0R1W7 72 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 UBE2DNLQ8IWF7 75 aa19.33■□□□□ 0.68
RAPGEF1-203ENST00000372195 MYLKQ15746 1914 aa19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 DEFB121Q5J5C9 76 aa19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 MRPL27Q9P0M9 148 aaKnown RBP19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 CEP290O15078 2479 aa19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 MBD3L4A6NDZ8 208 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 MBD3L3A6NE82 208 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 MBD3L5A6NJ08 208 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 MBD3L2Q8NHZ7 208 aaPredicted RBP19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 ZNF524Q96C55 264 aa19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 COX11Q9Y6N1 276 aa19.32■□□□□ 0.68
RAPGEF1-203ENST00000372195 YLPM1P49750 1951 aaKnown RBP19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 LY96Q9Y6Y9 160 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 C9JAW5 83 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 DTX2Q86UW9 622 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 ITGB1BP1O14713 200 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 DEFB130BP0DP73 79 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 DEFB130AP0DP74 79 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 SPINK8P0C7L1 97 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 GAGE2AQ6NT46 116 aa19.31■□□□□ 0.68
RAPGEF1-203ENST00000372195 A8MWP6 167 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 RASL10AQ92737 203 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 SHANK2-AS3Q9BTD1 123 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 C6orf226Q5I0X4 101 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 FAM231BA6NCW3 169 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 ATP6V0E1O15342 81 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 RNF5Q99942 180 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 TIMM21Q9BVV7 248 aa19.3■□□□□ 0.68
RAPGEF1-203ENST00000372195 ZNF726P1Q15940 193 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 B4DSR2 109 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 ZSWIM8A7E2V4 1837 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 FOXL2NBQ6ZUU3 175 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 ZNF503-AS2A6NEH8 195 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 INS-IGF2F8WCM5 200 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 INSP01308 110 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 TRPM7Q96QT4 1865 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 CACNA1DQ01668 2161 aa19.29■□□□□ 0.68
RAPGEF1-203ENST00000372195 FAM223BA6NKX1 122 aa19.28■□□□□ 0.68
RAPGEF1-203ENST00000372195 LGALS1P09382 135 aaKnown RBP19.28■□□□□ 0.68
RAPGEF1-203ENST00000372195 FAM223AQ8IWN6 122 aa19.28■□□□□ 0.68
RAPGEF1-203ENST00000372195 LIME1Q9H400 295 aa19.28■□□□□ 0.68
RAPGEF1-203ENST00000372195 DEFB131AP59861 70 aa19.28■□□□□ 0.68
RAPGEF1-203ENST00000372195 G3V318 75 aa19.27■□□□□ 0.68
RAPGEF1-203ENST00000372195 NDUFB8O95169 186 aa19.27■□□□□ 0.68
RAPGEF1-203ENST00000372195 PAX9P55771 341 aa19.27■□□□□ 0.68
RAPGEF1-203ENST00000372195 Q6ZS49 121 aa19.27■□□□□ 0.67
RAPGEF1-203ENST00000372195 TCF20Q9UGU0 1960 aaKnown RBP19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 SPINK13Q1W4C9 94 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 NEGR1Q7Z3B1 354 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 WDR86Q86TI4 376 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 SNHG12Q9BXW3 62 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 KIAA2026Q5HYC2 2103 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 PLXNA3P51805 1871 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 TPSG1Q9NRR2 321 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 TP53TG1Q9Y2A0 90 aa19.26■□□□□ 0.67
RAPGEF1-203ENST00000372195 LEPROTO15243 131 aa19.25■□□□□ 0.67
RAPGEF1-203ENST00000372195 DSCR9P59020 149 aa19.25■□□□□ 0.67
RAPGEF1-203ENST00000372195 LYPD1Q8N2G4 141 aa19.25■□□□□ 0.67
RAPGEF1-203ENST00000372195 CD5LO43866 347 aa19.25■□□□□ 0.67
RAPGEF1-203ENST00000372195 XCL2Q9UBD3 114 aa19.25■□□□□ 0.67
RAPGEF1-203ENST00000372195 TRAV12-2A0A075B6T6 113 aa19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 PRIMA1Q86XR5 153 aa19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 USMG5Q96IX5 58 aa19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 C18orf32Q8TCD1 76 aa19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 RSPO3Q9BXY4 272 aaPredicted RBP19.24■□□□□ 0.67
RAPGEF1-203ENST00000372195 IGHV3-38A0A0C4DH36 116 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms