RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 ZNF491Q8N8L2 437 aa11.01□□□□□ -0.65
LDB3-204ENST00000372066 VN1R17PQ8TDU5 208 aa11.01□□□□□ -0.65
LDB3-204ENST00000372066 GRAMD2BQ96HH9 432 aa11.01□□□□□ -0.65
LDB3-204ENST00000372066 AJUBAQ96IF1 538 aa11.01□□□□□ -0.65
LDB3-204ENST00000372066 PACRGQ96M98 296 aaPredicted RBP11.01□□□□□ -0.65
LDB3-204ENST00000372066 RNASE7Q9H1E1 156 aaKnown RBP11.01□□□□□ -0.65
LDB3-204ENST00000372066 C7orf69Q9H7B7 122 aa11.01□□□□□ -0.65
LDB3-204ENST00000372066 IZUMO1RA6ND01 250 aa11□□□□□ -0.65
LDB3-204ENST00000372066 ZNF705GA8MUZ8 300 aaPredicted RBP11□□□□□ -0.65
LDB3-204ENST00000372066 LINC00587B1AMM8 73 aa11□□□□□ -0.65
LDB3-204ENST00000372066 TCRAP04437 139 aa11□□□□□ -0.65
LDB3-204ENST00000372066 FABP4P15090 132 aa11□□□□□ -0.65
LDB3-204ENST00000372066 PAX8Q06710 450 aa11□□□□□ -0.65
LDB3-204ENST00000372066 FBLN7Q53RD9 439 aa11□□□□□ -0.65
LDB3-204ENST00000372066 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
LDB3-204ENST00000372066 TMEM18Q96B42 140 aa11□□□□□ -0.65
LDB3-204ENST00000372066 ZNF492Q9P255 531 aa11□□□□□ -0.65
LDB3-204ENST00000372066 IL4P05112 153 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 GATA3P23771 443 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 ADMP35318 185 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 PDE6HQ13956 83 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 Q56UQ5 140 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 CT83Q5H943 113 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 ARL6IP6Q8N6S5 226 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 CMTM2Q8TAZ6 248 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 MRPL18Q9H0U6 180 aaKnown RBP10.99□□□□□ -0.65
LDB3-204ENST00000372066 TENM1Q9UKZ4 2725 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 TRBV19A0A075B6N1 114 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 LTAP01374 205 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 HLA-DQA1P01909 254 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 AMY1AP04745 511 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 IGLC2P0DOY2 106 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 GNG5P63218 68 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 PDZD11Q5EBL8 140 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 WIPF2Q8TF74 440 aaPredicted RBP10.99□□□□□ -0.65
LDB3-204ENST00000372066 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 ESM1Q9NQ30 184 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 SERTAD4Q9NUC0 356 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 ZNF586Q9NXT0 402 aa10.99□□□□□ -0.65
LDB3-204ENST00000372066 CENPVL3A0A0U1RRI6 287 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 SERTM2A0A1B0GWG4 89 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 SNURFLB1AK76 121 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 K7EQM0 130 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 AMBPP02760 352 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 EGR2P11161 476 aaPredicted RBP10.98□□□□□ -0.65
LDB3-204ENST00000372066 USF2Q15853 346 aaPredicted RBP10.98□□□□□ -0.65
LDB3-204ENST00000372066 LEMD1Q68G75 181 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 OR5R1Q8NH85 324 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 LINC00479Q96M42 142 aa10.98□□□□□ -0.65
LDB3-204ENST00000372066 WNK2Q9Y3S1 2297 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 TRAV34A0A0B4J273 112 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 F8W735 103 aaPredicted RBP10.97□□□□□ -0.65
LDB3-204ENST00000372066 NDUFB8O95169 186 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 CBLN1P23435 193 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 IER3P46695 156 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 KLF17Q5JT82 389 aaPredicted RBP10.97□□□□□ -0.65
LDB3-204ENST00000372066 GBGT1Q8N5D6 347 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 NUDT10Q8NFP7 164 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 TSKUQ8WUA8 353 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 NUDT11Q96G61 164 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 ATP6V0BQ99437 205 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 NAT8BQ9UHF3 227 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
LDB3-204ENST00000372066 IGHV1-69DA0A0B4J2H0 117 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 MRPS12O15235 138 aaKnown RBP10.96□□□□□ -0.65
LDB3-204ENST00000372066 OR2J3O76001 311 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 IGHV1-69P01742 117 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 ESDP10768 282 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 RAB9AP51151 201 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 Q0VG73 95 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 UNQ5815/PRO19632Q6UWF5 114 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 ATP5L2Q7Z4Y8 100 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 Q86TA4 180 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 TMEM75Q8N9X5 138 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 MOB4Q9Y3A3 225 aa10.96□□□□□ -0.65
LDB3-204ENST00000372066 SOX21Q9Y651 276 aaPredicted RBP10.96□□□□□ -0.65
LDB3-204ENST00000372066 FAM231BA6NCW3 169 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 FBLL1A6NHQ2 334 aaKnown RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 ZNF253O75346 499 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 CRISP2P16562 243 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 RPL7P18124 248 aaKnown RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 CRIP2P52943 208 aaPredicted RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 JOSD1Q15040 202 aaPredicted RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 TMEM136Q6ZRR5 245 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 SIGLECL1Q8N7X8 197 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 NHLRC2Q8NBF2 726 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 ZNF747Q9BV97 191 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 GFRA4Q9GZZ7 299 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 RPP21Q9H633 154 aaKnown RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 ZNF331Q9NQX6 463 aaPredicted RBP10.95□□□□□ -0.66
LDB3-204ENST00000372066 RPH3ALQ9UNE2 315 aa10.95□□□□□ -0.66
LDB3-204ENST00000372066 C19orf71A6NCJ1 209 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 A8MWL6 223 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 BMPR1BO00238 502 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 ATP6V0E1O15342 81 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 FSHBP01225 129 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 PSG9Q00887 426 aa10.94□□□□□ -0.66
LDB3-204ENST00000372066 SIGLEC15Q6ZMC9 328 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms