RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 DEFB131AP59861 70 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 ZNF625Q96I27 306 aaPredicted RBP17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 CACNA1EQ15878 2313 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 RNF166Q96A37 237 aaPredicted RBP17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 LY96Q9Y6Y9 160 aa17.94■□□□□ 0.46
TM9SF3-201ENST00000371142 C1QTNF4Q9BXJ3 329 aa17.93■□□□□ 0.46
TM9SF3-201ENST00000371142 SYS1-DBNDD2H3BUS1 97 aa17.93■□□□□ 0.46
TM9SF3-201ENST00000371142 DKK1O94907 266 aa17.93■□□□□ 0.46
TM9SF3-201ENST00000371142 IL17RELQ6ZVW7 336 aa17.93■□□□□ 0.46
TM9SF3-201ENST00000371142 GBF1Q92538 1859 aa17.93■□□□□ 0.46
TM9SF3-201ENST00000371142 LGALS1P09382 135 aaKnown RBP17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 C1orf122Q6ZSJ8 110 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 A0A1W2PPI3 338 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 SLC25A16P16260 332 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 C1orf194Q5T5A4 169 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 ITGB1BP1O14713 200 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 SHANK2-AS3Q9BTD1 123 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 C2orf82Q6UX34 121 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 TIMM21Q9BVV7 248 aa17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 TP53BP1Q12888 1972 aaPredicted RBP17.92■□□□□ 0.46
TM9SF3-201ENST00000371142 LEPROTO15243 131 aa17.91■□□□□ 0.46
TM9SF3-201ENST00000371142 KNCNA6PVL3 124 aa17.91■□□□□ 0.46
TM9SF3-201ENST00000371142 CFHR3Q02985 330 aa17.91■□□□□ 0.46
TM9SF3-201ENST00000371142 ATP6V0E1O15342 81 aa17.91■□□□□ 0.46
TM9SF3-201ENST00000371142 CACNA1DQ01668 2161 aa17.91■□□□□ 0.46
TM9SF3-201ENST00000371142 TRAV8-3A0A0A6YYJ7 113 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 ARMS2P0C7Q2 107 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 C8orf49Q96NF6 230 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 LIME1Q9H400 295 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 ZC2HC1BQ5TFG8 222 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 MPV17L2Q567V2 206 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 SS18Q15532 418 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 GAGE2EQ4V326 116 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 PRIMA1Q86XR5 153 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 GAGE2DQ9UEU5 116 aa17.9■□□□□ 0.46
TM9SF3-201ENST00000371142 FOXL2NBQ6ZUU3 175 aa17.89■□□□□ 0.46
TM9SF3-201ENST00000371142 ZNF48Q96MX3 618 aaPredicted RBP17.89■□□□□ 0.46
TM9SF3-201ENST00000371142 OCIAD2Q56VL3 154 aa17.89■□□□□ 0.45
TM9SF3-201ENST00000371142 MYMXA0A1B0GTQ4 84 aa17.89■□□□□ 0.45
TM9SF3-201ENST00000371142 Q6ZS49 121 aa17.89■□□□□ 0.45
TM9SF3-201ENST00000371142 XCL2Q9UBD3 114 aa17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 F8WEM9 126 aa17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 SP5Q6BEB4 398 aaPredicted RBP17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 ZNF562Q6V9R5 426 aa17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 ESDP10768 282 aa17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 RNF114Q9Y508 228 aa17.88■□□□□ 0.45
TM9SF3-201ENST00000371142 IGHV3-16A0A0C4DH30 117 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 TNFRSF6BO95407 300 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 SSBP2P81877 361 aaPredicted RBP17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 GAGE2BQ13066 116 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 TMEM213A2RRL7 107 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 AKAP6Q13023 2319 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 MRPL27Q9P0M9 148 aaKnown RBP17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 MSMBP08118 114 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 C3orf56Q8N813 242 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 KIR3DS1Q14943 382 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 KLK9Q9UKQ9 250 aa17.87■□□□□ 0.45
TM9SF3-201ENST00000371142 LY6G5BQ8NDX9 201 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 ANK1P16157 1881 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 SPINK13Q1W4C9 94 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 DLX4Q92988 240 aaPredicted RBP17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 LYL1P12980 280 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 LTBP1Q14766 1721 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 IGKV1-6A0A0C4DH72 117 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 ZFAND6Q6FIF0 208 aa17.86■□□□□ 0.45
TM9SF3-201ENST00000371142 INTS1Q8N201 2190 aaKnown RBP17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 NDUFB8O95169 186 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 SRSF8Q9BRL6 282 aaKnown RBP17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 GAGE12JA6NER3 117 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 GAGE1Q13065 139 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 GAGE4Q13068 117 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 GAGE5Q13069 117 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 TRPT1Q86TN4 253 aaKnown RBP17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 CHAC1Q9BUX1 264 aa17.85■□□□□ 0.45
TM9SF3-201ENST00000371142 FNDC10F2Z333 226 aa17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 STPG4Q8N801 248 aa17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 FER1L5A0AVI2 2057 aa17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 MED12Q93074 2177 aa17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 G3V318 75 aa17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 FAM110DQ8TAY7 271 aaPredicted RBP17.84■□□□□ 0.45
TM9SF3-201ENST00000371142 CFHR2P36980 270 aa17.83■□□□□ 0.45
TM9SF3-201ENST00000371142 UBE2E1P51965 193 aa17.83■□□□□ 0.45
TM9SF3-201ENST00000371142 DUX4L9Q6RFH8 374 aaPredicted RBP17.83■□□□□ 0.45
TM9SF3-201ENST00000371142 TMEM75Q8N9X5 138 aa17.83■□□□□ 0.45
TM9SF3-201ENST00000371142 COL4A6Q14031 1691 aa17.83■□□□□ 0.44
TM9SF3-201ENST00000371142 PYY3Q5JQD4 70 aa17.83■□□□□ 0.44
TM9SF3-201ENST00000371142 GFRA4Q9GZZ7 299 aa17.83■□□□□ 0.44
TM9SF3-201ENST00000371142 TRPM7Q96QT4 1865 aa17.83■□□□□ 0.44
TM9SF3-201ENST00000371142 FHL1Q13642 323 aa17.83■□□□□ 0.44
TM9SF3-201ENST00000371142 LRRK1Q38SD2 2015 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 PDE6HQ13956 83 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 TP53TG1Q9Y2A0 90 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 LINC01619G3V211 115 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 ADCYAP1P18509 176 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 VWC2LB2RUY7 222 aa17.82■□□□□ 0.44
TM9SF3-201ENST00000371142 NDUFS8O00217 210 aa17.81■□□□□ 0.44
TM9SF3-201ENST00000371142 GAGE2AQ6NT46 116 aa17.81■□□□□ 0.44
TM9SF3-201ENST00000371142 F5H768 121 aa17.81■□□□□ 0.44
TM9SF3-201ENST00000371142 Q96MF0 132 aa17.81■□□□□ 0.44
TM9SF3-201ENST00000371142 IGHV1-69DA0A0B4J2H0 117 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms