RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 ATP1A1-AS1Q5TC04 95 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
GPC4-201ENST00000370828 IGLV3-12A0A075B6K2 115 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 K7EN84 100 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 SYNJ2BPP57105 145 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 DOCK7Q96N67 2140 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 DENND4AQ7Z401 1863 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 NPC2P61916 151 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 VDAC2P45880 294 aaPredicted RBP10.36□□□□□ -0.75
GPC4-201ENST00000370828 ZDBF2Q9HCK1 2354 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 IGKV3D-20A0A0C4DH25 116 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 C1orf195Q5TG92 126 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 SAP25Q8TEE9 199 aa10.36□□□□□ -0.75
GPC4-201ENST00000370828 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 Q8TAT8 98 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 LINC00312Q9Y6C7 94 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 CADP27708 2225 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 TRAV13-1A0A0B4J241 112 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 SMIM27A0A1W2PRY6 76 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
GPC4-201ENST00000370828 SIGLEC8Q9NYZ4 499 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 TMEM213A2RRL7 107 aa10.35□□□□□ -0.75
GPC4-201ENST00000370828 UTF1Q5T230 341 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 MRPL14Q6P1L8 145 aaKnown RBP10.34□□□□□ -0.75
GPC4-201ENST00000370828 LAMTOR3Q9UHA4 124 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 PLNP26678 52 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 DEFB124Q8NES8 71 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 SH2D1AO60880 128 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 RNASE4P34096 147 aaKnown RBP10.34□□□□□ -0.75
GPC4-201ENST00000370828 ATP5J2P56134 94 aa10.34□□□□□ -0.75
GPC4-201ENST00000370828 RPUSD1Q9UJJ7 312 aaKnown RBP10.34□□□□□ -0.75
GPC4-201ENST00000370828 PVRIGQ6DKI7 326 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 Q86TA4 180 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 GGNQ86UU5 652 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 FAM90A1Q86YD7 464 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 CRIPAKQ8N1N5 446 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 GLMPQ8WWB7 406 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 FAM168AQ92567 244 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 U3KQE9 123 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 NOTCH3Q9UM47 2321 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 H7C1H1 209 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 ATOX1O00244 68 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 CFHR1Q03591 330 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 CD177Q8N6Q3 437 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 PINLYPA6NC86 204 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 LINC01549A6NIU2 74 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 CACNA1HO95180 2353 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 INAFM2P0DMQ5 153 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 SPATA25Q9BR10 227 aa10.33□□□□□ -0.76
GPC4-201ENST00000370828 CREBBPQ92793 2442 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 PKDREJQ9NTG1 2253 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 PLXND1Q9Y4D7 1925 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 SMIM9A6NGZ8 99 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 NPFFO15130 113 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 ATP5G2Q06055 141 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 RNASE2P10153 161 aaKnown RBP10.32□□□□□ -0.76
GPC4-201ENST00000370828 SLC25A15Q9Y619 301 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 ZCCHC24Q8N2G6 241 aaKnown RBP10.32□□□□□ -0.76
GPC4-201ENST00000370828 RNF182Q8N6D2 247 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 A0A1W2PPI3 338 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 M0R2P5 195 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 UBE2L6O14933 153 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 TRIP6Q15654 476 aaKnown RBP10.32□□□□□ -0.76
GPC4-201ENST00000370828 EEF1AKMT3Q96AZ1 226 aa10.32□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
GPC4-201ENST00000370828 TAX1BP3O14907 124 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
GPC4-201ENST00000370828 SP9P0CG40 484 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1A1P0DJD3 496 aaKnown RBP10.31□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1CP0DJD4 496 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 RBMY1FQ15415 496 aaKnown RBP10.31□□□□□ -0.76
GPC4-201ENST00000370828 CLEC19AQ6UXS0 136 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 LINC00173Q6ZV60 143 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 IGFL4Q6B9Z1 124 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 C1orf210Q8IVY1 113 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 C11orf52Q96A22 123 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 TNFRSF18Q9Y5U5 241 aa10.31□□□□□ -0.76
GPC4-201ENST00000370828 CNOT1A5YKK6 2376 aaKnown RBP10.3□□□□□ -0.76
GPC4-201ENST00000370828 EPOPA6NHQ4 379 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 IGKV1-16P04430 117 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 DDB2Q92466 427 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 TMEM243Q9BU79 118 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 TMEM133Q9H2Q1 129 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 DPM3Q9P2X0 92 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 FAM27E3Q08E93 113 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 LGALS9BQ3B8N2 356 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 LGALS9CQ6DKI2 356 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 TRGV9Q99603 122 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 TSC2P49815 1807 aa10.3□□□□□ -0.76
GPC4-201ENST00000370828 NDUFV3P56181 108 aaKnown RBP10.29□□□□□ -0.76
GPC4-201ENST00000370828 FAM231DQ6ZW35 169 aa10.29□□□□□ -0.76
GPC4-201ENST00000370828 PCP2Q8IVA1 136 aa10.29□□□□□ -0.76
GPC4-201ENST00000370828 TOMM7Q9P0U1 55 aa10.29□□□□□ -0.76
GPC4-201ENST00000370828 SRRM5B3KS81 715 aa10.29□□□□□ -0.76
GPC4-201ENST00000370828 TAL2Q16559 108 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms