RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 SETD2Q9BYW2 2564 aaPredicted RBP7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 IGHV1-24A0A0C4DH33 117 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 INS-IGF2F8WCM5 200 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 PRB1P04280 392 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 SUB1P53999 127 aaKnown RBP eCLIP7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 UBE2L3P68036 154 aaKnown RBP7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 RITA1Q96K30 269 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 RNF5Q99942 180 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 LRBAP50851 2863 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 RNASE2P10153 161 aaKnown RBP7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 C10orf55Q5SWW7 151 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 OR8A1Q8NGG7 326 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 PGLYRP4Q96LB8 373 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 ST20Q9HBF5 79 aa7.95□□□□□ -1.14
PRPF38B-203ENST00000370025 TRAV9-1A0A075B6T8 112 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 IZUMO1RA6ND01 250 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 GNG5P63218 68 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 TMEM97Q5BJF2 176 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 WFDC3Q8IUB2 231 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 HRNRQ86YZ3 2850 aaPredicted RBP7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 IGSF10Q6WRI0 2623 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 A0A0G2JLM5 398 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 ZFP36P26651 326 aaKnown RBP7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 RAB9AP51151 201 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 CCL19Q99731 98 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 COL12A1Q99715 3063 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 CHEK1O14757 476 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 KLRD1Q13241 179 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 VMO1Q7Z5L0 202 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 URB1-AS1Q96HZ7 61 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 MAP1LC3CQ9BXW4 147 aa7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 TSSC4Q9Y5U2 329 aaPredicted RBP7.94□□□□□ -1.14
PRPF38B-203ENST00000370025 TRAV26-1A0A087WT03 109 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 A0A1W2PPI3 338 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 PYYP10082 97 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 KIR3DS1Q14943 382 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 TPSG1Q9NRR2 321 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 SIGLEC9Q9Y336 463 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 C9JCJ5 164 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 E7EUB6 86 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 TIMM23O14925 209 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 MOSP00540 346 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 IGHV4-39P01824 125 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 RPL27AP46776 148 aaKnown RBP7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 NMUP48645 174 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 HIST1H1AQ02539 215 aaPredicted RBP7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 IGHV3OR16-8A0A075B7F1 116 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 IGHV3-35A0A0C4DH35 117 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 LOC389332A0A1B0GUA5 103 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 ODF3BA8MYP8 253 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 NDUFS8O00217 210 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 CNTFRP26992 372 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 CACNG8Q8WXS5 425 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 OSTCQ9NRP0 149 aa7.93□□□□□ -1.14
PRPF38B-203ENST00000370025 TMSB15BA0A087X1C1 80 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 CRYGBP07316 175 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 WT1-ASQ06250 92 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 CD69Q07108 199 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 MORN5Q5VZ52 161 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 CCDC144NLQ6NUI1 221 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 PPP1R27Q86WC6 154 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 SCRT2Q9NQ03 307 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 FAM208BQ5VWN6 2430 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 VWC2LB2RUY7 222 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 LMO4P61968 165 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 ZNF843Q8N446 348 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 IGFBPL1Q8WX77 278 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 RABAC1Q9UI14 185 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 CSPG4Q6UVK1 2322 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 A0A1B0GV72 72 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 SMIM27A0A1W2PRY6 76 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 CGB1A6NKQ9 187 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 NCR2O95944 276 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 IGLV2-8P01709 118 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 SCGB2A2Q13296 93 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 MINOS1Q5TGZ0 78 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 SIGMAR1Q99720 223 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 FBXL15Q9H469 300 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 MINOS1-NBL1R4GNA1 71 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 USP24Q9UPU5 2620 aa7.92□□□□□ -1.14
PRPF38B-203ENST00000370025 PTPN13Q12923 2485 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 OOSP1A8MZH6 123 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 K7ERJ3 54 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 HES1Q14469 280 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 MRGPRG-AS1Q2M3A8 158 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 PIMREGQ9BSJ6 248 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 TMUB1Q9BVT8 246 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 SIRPDQ9H106 197 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 SLC25A5P05141 298 aaKnown RBP7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 OR5AL1P0C617 328 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 CKS1BP61024 79 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 DAZAP1Q96EP5 407 aaKnown RBP7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 C1orf159Q96HA4 380 aa7.91□□□□□ -1.14
PRPF38B-203ENST00000370025 TXNDC17Q9BRA2 123 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms