RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 CSTL1Q9H114 145 aa10.27□□□□□ -0.77
HCFC1-202ENST00000369984 THSD7AQ9UPZ6 1657 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 USF3Q68DE3 2245 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 SRRM4A7MD48 611 aaKnown RBP10.26□□□□□ -0.77
HCFC1-202ENST00000369984 MPV17L2Q567V2 206 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 ZCCHC24Q8N2G6 241 aaKnown RBP10.26□□□□□ -0.77
HCFC1-202ENST00000369984 TSSC4Q9Y5U2 329 aaPredicted RBP10.26□□□□□ -0.77
HCFC1-202ENST00000369984 TRBV24-1A0A075B6N3 115 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 TRBV7-1A0A0A6YYK4 115 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 VCYO14598 125 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 FGF16O43320 207 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 TGFBR3LH3BV60 316 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 MMP23AO75900 390 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 THBDP07204 575 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 H0YIZ8 118 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 BAALCQ8WXS3 180 aa10.26□□□□□ -0.77
HCFC1-202ENST00000369984 SAP30O75446 220 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 HAMPP81172 84 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 SYS1-DBNDD2H3BUS1 97 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 A0A087WV48 116 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 COLCA2A8K830 154 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 VMO1Q7Z5L0 202 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 TMEM219Q86XT9 240 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 SORL1Q92673 2214 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 EPOPA6NHQ4 379 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 SH2D1AO60880 128 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 AGMATQ9BSE5 352 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 EML5Q05BV3 1969 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 IGKV1-9A0A0C4DH69 117 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 RPL36AP83881 106 aaKnown RBP10.25□□□□□ -0.77
HCFC1-202ENST00000369984 SRSF7Q16629 238 aaKnown RBP eCLIP10.25□□□□□ -0.77
HCFC1-202ENST00000369984 LCN12Q6JVE5 192 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 RPL36ALQ969Q0 106 aaKnown RBP10.25□□□□□ -0.77
HCFC1-202ENST00000369984 IGHV2-26A0A0B4J1V2 119 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 CGB7P0DN87 165 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 ZNF138P52744 262 aa10.25□□□□□ -0.77
HCFC1-202ENST00000369984 J3QRE1 110 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 POU2AF1Q16633 256 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 DENND4CQ5VZ89 1909 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
HCFC1-202ENST00000369984 TCF15Q12870 199 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 TIMM21Q9BVV7 248 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 NDPQ00604 133 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 ID3Q02535 119 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 LINC01551Q86U37 167 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 TMEM158Q8WZ71 300 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 TRAV25A0A0B4J276 109 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 IGHV1-18A0A0C4DH31 117 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 MYMXA0A1B0GTQ4 84 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 ZNF561-AS1K7EIQ3 104 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 SPATA31B1PQ5VZV4 182 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 TRGV9Q99603 122 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 LYNX1G3V0Z9 82 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 CGB3P0DN86 165 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 LYNX1P0DP58 116 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 PCDH15Q96QU1 1955 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 A0A1B0GW64 132 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 MPZP25189 248 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 SEC61GP60059 68 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 SPXQ9BT56 116 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 LINC00527Q9UJ94 153 aa10.24□□□□□ -0.77
HCFC1-202ENST00000369984 KIAA1549LQ6ZVL6 1849 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 C1QTNF4Q9BXJ3 329 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 SPRR3Q9UBC9 169 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 CSRP3P50461 194 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 TMEM256Q8N2U0 113 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 PMVKQ15126 192 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 IGHV3-53P01767 116 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
HCFC1-202ENST00000369984 RPUSD1Q9UJJ7 312 aaKnown RBP10.23□□□□□ -0.77
HCFC1-202ENST00000369984 TRAV1-1A0A0B4J248 108 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 FCN3O75636 299 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 C1orf159Q96HA4 380 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 AZU1P20160 251 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 PAQR4Q8N4S7 273 aaPredicted RBP10.22□□□□□ -0.77
HCFC1-202ENST00000369984 RS1O15537 224 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 GLRX5Q86SX6 157 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 C14orf178Q8N769 122 aaPredicted RBP10.22□□□□□ -0.77
HCFC1-202ENST00000369984 LINC00477Q96M19 166 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 PKIGQ9Y2B9 76 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 IGKV1D-8A0A087WSZ0 117 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 CACNA1HO95180 2353 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 A0A1W2PPI3 338 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 A0A1W2PR77 199 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 SMKR1H3BMG3 65 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 PLXNA4Q9HCM2 1894 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 BMPERQ8N8U9 685 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 Q8TAT8 98 aa10.22□□□□□ -0.77
HCFC1-202ENST00000369984 FAM166AQ6J272 317 aa10.21□□□□□ -0.77
HCFC1-202ENST00000369984 FBLN5Q9UBX5 448 aa10.21□□□□□ -0.77
HCFC1-202ENST00000369984 AGRNO00468 2067 aa10.21□□□□□ -0.77
HCFC1-202ENST00000369984 MORN5Q5VZ52 161 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 SPSB3Q6PJ21 355 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 PRIMA1Q86XR5 153 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 ADAMTS9Q9P2N4 1935 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 B5MCH6 92 aa10.21□□□□□ -0.78
HCFC1-202ENST00000369984 ZNF106Q9H2Y7 1883 aaKnown RBP10.21□□□□□ -0.78
HCFC1-202ENST00000369984 IGHV1-3A0A0C4DH29 117 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms