RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SLC7A5P1Q8MH63 180 aa9.35□□□□□ -0.91
TUBE1-202ENST00000368662 RARRES2Q99969 163 aa9.35□□□□□ -0.91
TUBE1-202ENST00000368662 SIGLEC8Q9NYZ4 499 aa9.35□□□□□ -0.91
TUBE1-202ENST00000368662 WNK1Q9H4A3 2382 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 SAMD13Q5VXD3 122 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 C12orf54Q6X4T0 127 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 C3orf56Q8N813 242 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 TCEAL7Q9BRU2 100 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 SMAD5-AS1Q9Y6J3 95 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
TUBE1-202ENST00000368662 PDE6DO43924 150 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 RANP62826 216 aaKnown RBP9.34□□□□□ -0.91
TUBE1-202ENST00000368662 ICAM4Q14773 271 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 RXFP4Q8TDU9 374 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 SLC50A1Q9BRV3 221 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 TREM1Q9NP99 234 aa9.34□□□□□ -0.91
TUBE1-202ENST00000368662 YTHDF2Q9Y5A9 579 aaKnown RBP9.34□□□□□ -0.91
TUBE1-202ENST00000368662 COL6A5A8TX70 2615 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 CSN3P07498 182 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 RPL11P62913 178 aaKnown RBP9.33□□□□□ -0.92
TUBE1-202ENST00000368662 SHISA2Q6UWI4 295 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 TCF24Q7RTU0 167 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 CITED4Q96RK1 184 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 AAMDCQ9H7C9 122 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 NRN1Q9NPD7 142 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 CLEC5AQ9NY25 188 aa9.33□□□□□ -0.92
TUBE1-202ENST00000368662 SNRPCP09234 159 aaKnown RBP9.32□□□□□ -0.92
TUBE1-202ENST00000368662 SUMO1P63165 101 aaKnown RBP9.32□□□□□ -0.92
TUBE1-202ENST00000368662 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
TUBE1-202ENST00000368662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 Q9H3A6 140 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 OTORQ9NRC9 128 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 GGTLC3B5MD39 225 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 F6UZH7 168 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 H3BTX0 84 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 NDUFB4O95168 129 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 EDN2P20800 178 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 CD81P60033 236 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 CCDC28AQ8IWP9 274 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 DYNLRB2Q8TF09 96 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 C17orf77Q96MU5 243 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 SLC35B3Q9H1N7 401 aa9.32□□□□□ -0.92
TUBE1-202ENST00000368662 ATP5G3P48201 142 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 ADAMTSL5Q6ZMM2 481 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 LINC00482Q8N8I6 264 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 ZNF331Q9NQX6 463 aaPredicted RBP9.31□□□□□ -0.92
TUBE1-202ENST00000368662 MLXQ9UH92 298 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 PGPA6NDG6 321 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 SLC17A3O00476 420 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 PAFAH1B2P68402 229 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 C5orf17Q8NAS9 161 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
TUBE1-202ENST00000368662 SRP19P09132 144 aaKnown RBP9.3□□□□□ -0.92
TUBE1-202ENST00000368662 RBPMS2Q6ZRY4 209 aaKnown RBP9.3□□□□□ -0.92
TUBE1-202ENST00000368662 HIST1H2BAQ96A08 127 aa9.3□□□□□ -0.92
TUBE1-202ENST00000368662 RPUSD4Q96CM3 377 aaKnown RBP9.3□□□□□ -0.92
TUBE1-202ENST00000368662 C16orf92Q96LL3 132 aa9.3□□□□□ -0.92
TUBE1-202ENST00000368662 PRELID1Q9Y255 219 aa9.3□□□□□ -0.92
TUBE1-202ENST00000368662 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
TUBE1-202ENST00000368662 TRAV25A0A0B4J276 109 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 ISLRO14498 428 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 SAP30O75446 220 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 SLC25A5P05141 298 aaKnown RBP9.29□□□□□ -0.92
TUBE1-202ENST00000368662 SFTA3P0C7M3 94 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 TRAV2A0A0B4J234 112 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 TMEM218A2RU14 115 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 DNASE2O00115 360 aaPredicted RBP9.29□□□□□ -0.92
TUBE1-202ENST00000368662 ID1P41134 155 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 CSN1S1P47710 185 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 DEFB114Q30KQ6 69 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 CYB561D1Q8N8Q1 229 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 MS4A6AQ9H2W1 248 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 EPDR1Q9UM22 224 aa9.29□□□□□ -0.92
TUBE1-202ENST00000368662 KRBOX1C9JBD0 128 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 C9JQL5 133 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 TSPAN4O14817 238 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 LURAP1LQ8IV03 231 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 OR2K2Q8NGT1 345 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 DCANP1Q8TF63 244 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 MRPL53Q96EL3 112 aaKnown RBP9.28□□□□□ -0.92
TUBE1-202ENST00000368662 ATG101Q9BSB4 218 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 SERTM2A0A1B0GWG4 89 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 SOCS3O14543 225 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 INSL3P51460 131 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 SOHLH1Q5JUK2 328 aa9.28□□□□□ -0.92
TUBE1-202ENST00000368662 MCRIP2Q9BUT9 160 aaKnown RBP9.28□□□□□ -0.92
TUBE1-202ENST00000368662 SCO2A0A1W2PP80 73 aa9.27□□□□□ -0.93
TUBE1-202ENST00000368662 K7EQM0 130 aa9.27□□□□□ -0.93
TUBE1-202ENST00000368662 PEX7O00628 323 aa9.27□□□□□ -0.93
TUBE1-202ENST00000368662 CEBPGP53567 150 aa9.27□□□□□ -0.93
TUBE1-202ENST00000368662 SNRPD3P62318 126 aaKnown RBP9.27□□□□□ -0.93
TUBE1-202ENST00000368662 CD300EQ496F6 205 aaPredicted RBP9.27□□□□□ -0.93
TUBE1-202ENST00000368662 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
TUBE1-202ENST00000368662 TMEM61Q8N0U2 210 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms