RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 TOMM40O96008 361 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 TGFAP01135 160 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 ID1P41134 155 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 FAM106AQ4KMX7 169 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 C1orf194Q5T5A4 169 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 DMRTC2Q8IXT2 367 aaPredicted RBP6.75□□□□□ -1.33
PTPRK-206ENST00000368215 WFDC12Q8WWY7 111 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 SHANK2-AS3Q9BTD1 123 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 LOC102724200A0A096LPH7 203 aaPredicted RBP6.75□□□□□ -1.33
PTPRK-206ENST00000368215 C7orf71A4D174 169 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 G3V318 75 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 IGLC1P0CG04 106 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
PTPRK-206ENST00000368215 CR1LQ2VPA4 569 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 RUSC1-AS1Q66K80 236 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 ZNF562Q6V9R5 426 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 LINC00469Q8N7U9 141 aa6.75□□□□□ -1.33
PTPRK-206ENST00000368215 POLR3KQ9Y2Y1 108 aaPredicted RBP6.75□□□□□ -1.33
PTPRK-206ENST00000368215 A6NNC1 897 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 FRMD6-AS1P0C7T7 363 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 YPEL3P61236 119 aaPredicted RBP6.74□□□□□ -1.33
PTPRK-206ENST00000368215 FBLN7Q53RD9 439 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 MINOS1Q5TGZ0 78 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 LYZL1Q6UWQ5 148 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 ATP5L2Q7Z4Y8 100 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 C17orf77Q96MU5 243 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 MINOS1-NBL1R4GNA1 71 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 VCANP13611 3396 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 NUPR1O60356 82 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 NUDT3O95989 172 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 TMEM249Q2WGJ8 235 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 PATE2Q6UY27 113 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 Q6ZWC4 215 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 PYGO2Q9BRQ0 406 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 ARMS2P0C7Q2 107 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 EVI2AP22794 236 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 UNQ6494/PRO21346Q6UXR6 183 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 ZNF414Q96IQ9 312 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 FAM181BA6NEQ2 426 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 NPFFO15130 113 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 PSG3Q16557 428 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 Q6AWC8 147 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 C18orf32Q8TCD1 76 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 RAB37Q96AX2 223 aa6.74□□□□□ -1.33
PTPRK-206ENST00000368215 TRAV41A0A0B4J266 112 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 ATP6V0E1O15342 81 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 LAMTOR2Q9Y2Q5 125 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 A8MWP6 167 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 D6R8Y8 96 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 H3BUX3 64 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 EREGO14944 169 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 RCHY1Q96PM5 261 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 SH2D1AO60880 128 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 PAX8Q06710 450 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 ERCC8Q13216 396 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 EBLN2Q6P2I7 272 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 SCGB1D4Q6XE38 83 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 C8orf49Q96NF6 230 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 TRBV19A0A075B6N1 114 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 TRAV9-2A0A087WT02 112 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 OOSP1A8MZH6 123 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 Q0VG73 95 aa6.73□□□□□ -1.33
PTPRK-206ENST00000368215 RNASE4P34096 147 aaKnown RBP6.72□□□□□ -1.33
PTPRK-206ENST00000368215 RNF182Q8N6D2 247 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 ZNF502Q8TBZ5 544 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 C12orf54Q6X4T0 127 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 AMN1Q8IY45 258 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 SLC50A1Q9BRV3 221 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 TMEM160Q9NX00 188 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 hDV102S1A0JD36 115 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 IGLV2-23P01705 113 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 GCSHP23434 173 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 FAM167A-AS1Q96KT0 104 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 MOB4Q9Y3A3 225 aa6.72□□□□□ -1.33
PTPRK-206ENST00000368215 A0A1B0GW15 77 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 SMIM27A0A1W2PRY6 76 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 FAM120AOSQ5T036 256 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 RASL11AQ6T310 242 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 CCDC168Q8NDH2 2452 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 TMEM213A2RRL7 107 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 DMRTA1Q5VZB9 504 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 FAM159AQ6UWV7 190 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 DEFB104AQ8WTQ1 72 aa6.71□□□□□ -1.33
PTPRK-206ENST00000368215 A6NDN8 102 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 CACNG7P62955 275 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 A0A0G2JLM5 398 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
PTPRK-206ENST00000368215 SIGLEC15Q6ZMC9 328 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 ZNF491Q8N8L2 437 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 MAPK1IP1LQ8NDC0 245 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 FOXC2Q99958 501 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 DSCAMO60469 2012 aa6.71□□□□□ -1.34
PTPRK-206ENST00000368215 IGHV3OR16-12A0A075B7B8 117 aa6.7□□□□□ -1.34
PTPRK-206ENST00000368215 TRAV8-6A0A0B4J262 113 aa6.7□□□□□ -1.34
PTPRK-206ENST00000368215 H3BVH4 76 aa6.7□□□□□ -1.34
PTPRK-206ENST00000368215 LEPP41159 167 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms