RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MRPL36Q9P0J6 103 aaKnown RBP9.46□□□□□ -0.9
USF1-203ENST00000368021 IGKV1D-37A0A075B6S9 117 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 CTXND1A0A1B0GTU2 59 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 TCRBV4S1A1TA0A5B7 111 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 LINC00869P0C866 280 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 STAG3L3P0CL85 134 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 SMIM17P0DL12 118 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 FAM90A2PQ658T7 463 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 NIT1Q86X76 327 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 TRGV9Q99603 122 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 RARRES2Q99969 163 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 C19orf24Q9BVV8 132 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 ZNF580Q9UK33 172 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 VPREB3Q9UKI3 123 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 COL6A5A8TX70 2615 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 SH2D7A6NKC9 451 aaPredicted RBP9.45□□□□□ -0.9
USF1-203ENST00000368021 ZFP92A6NM28 416 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 LINC01548A6NM66 108 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 IGHV3-48P01763 117 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 C19orf54Q5BKX5 351 aa9.45□□□□□ -0.9
USF1-203ENST00000368021 DNHD1Q96M86 4753 aa9.44□□□□□ -0.9
USF1-203ENST00000368021 TRBV9A0A0B4J1U6 114 aa9.44□□□□□ -0.9
USF1-203ENST00000368021 NDUFB8O95169 186 aa9.44□□□□□ -0.9
USF1-203ENST00000368021 TNFRSF19Q9NS68 423 aa9.44□□□□□ -0.9
USF1-203ENST00000368021 TRAV41A0A0B4J266 112 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 G3V318 75 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 H0Y8G0 127 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 BRI3O95415 125 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 IGLC1P0CG04 106 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 BLCAPP62952 87 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 VAMP3Q15836 100 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 GCSAMLQ5JQS6 135 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 VN1R17PQ8TDU5 208 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 DUX5Q96PT3 197 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 SLC25A22Q9H936 323 aa9.43□□□□□ -0.9
USF1-203ENST00000368021 IGHV3-21A0A0B4J1V1 117 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 A0A1W2PPV4 95 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 IGLC2P0DOY2 106 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 IGLC3P0DOY3 106 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 FCGR2BP31994 310 aaPredicted RBP9.42□□□□□ -0.9
USF1-203ENST00000368021 CTRLP40313 264 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 RHOBP62745 196 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 ZNF90Q03938 601 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 FOXL1Q12952 345 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 LCN15Q6UWW0 184 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 Q6ZN92 141 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 TMEM86BQ8N661 226 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 PSMB11A5LHX3 300 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 HMGB3O15347 200 aaKnown RBP9.42□□□□□ -0.9
USF1-203ENST00000368021 HOXA3O43365 443 aaPredicted RBP9.42□□□□□ -0.9
USF1-203ENST00000368021 MFAP4P55083 255 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 YPEL3P61236 119 aaPredicted RBP9.42□□□□□ -0.9
USF1-203ENST00000368021 CCL20P78556 96 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 Q0VG73 95 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 SIGLECL1Q8N7X8 197 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 NECAP1Q8NC96 275 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 ZNF418Q8TF45 676 aaPredicted RBP9.42□□□□□ -0.9
USF1-203ENST00000368021 GATAD1Q8WUU5 269 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 C21orf62Q9NYP8 219 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 TRAPPC1Q9Y5R8 145 aa9.42□□□□□ -0.9
USF1-203ENST00000368021 A0A1B0GV50 99 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 H3BUA1 57 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 OR2J3O76001 311 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 GATA2P23769 480 aaPredicted RBP9.41□□□□□ -0.9
USF1-203ENST00000368021 SAMD13Q5VXD3 122 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 GTF2H5Q6ZYL4 71 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 STPG4Q8N801 248 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 SSBP4Q9BWG4 385 aaPredicted RBP9.41□□□□□ -0.9
USF1-203ENST00000368021 FBXL7Q9UJT9 491 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 PAM16Q9Y3D7 125 aa9.41□□□□□ -0.9
USF1-203ENST00000368021 SCGB2A1O75556 95 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 IGKV1-17P01599 117 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 STAG3L2P0CL84 134 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 PPIFP30405 207 aaKnown RBP9.4□□□□□ -0.9
USF1-203ENST00000368021 PLP1P60201 277 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 C15orf32Q32M92 178 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 OR1L4Q8NGR5 311 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 TMEM37Q8WXS4 190 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 ATP6V0BQ99437 205 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 MDFIQ99750 246 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 SMIM7Q9BQ49 75 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 MRPL32Q9BYC8 188 aaKnown RBP9.4□□□□□ -0.9
USF1-203ENST00000368021 MANBALQ9NQG1 85 aa9.4□□□□□ -0.9
USF1-203ENST00000368021 FAM223BA6NKX1 122 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 F8W735 103 aaPredicted RBP9.4□□□□□ -0.91
USF1-203ENST00000368021 GNG7O60262 68 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 FAM78BQ5VT40 261 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 MRPL54Q6P161 138 aaKnown RBP9.4□□□□□ -0.91
USF1-203ENST00000368021 C12orf54Q6X4T0 127 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 Q6ZS46 218 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 FAM223AQ8IWN6 122 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 NPFFR1Q9GZQ6 430 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 ZNF355PQ9NSJ1 428 aa9.4□□□□□ -0.91
USF1-203ENST00000368021 OR7C2O60412 319 aa9.39□□□□□ -0.91
USF1-203ENST00000368021 TFPI2P48307 235 aa9.39□□□□□ -0.91
USF1-203ENST00000368021 PSMB3P49720 205 aa9.39□□□□□ -0.91
USF1-203ENST00000368021 ZNF502Q8TBZ5 544 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms