RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ZNF833PQ6ZTB9 187 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 C8orf31Q8N9H6 132 aa9.6□□□□□ -0.87
CDC42BPA-202ENST00000366764 HAPLN4Q86UW8 402 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 IGKV1-16P04430 117 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 GAGE12BA1L429 117 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 NDUFB8O95169 186 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 EXOC3-AS1Q8N2X6 119 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 CRIM1Q9NZV1 1036 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 YAE1D1Q9NRH1 226 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 C15orf65H3BRN8 121 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 DKK1O94907 266 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 HS3ST6Q96QI5 342 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 CDKN1AP38936 164 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 TNFRSF18Q9Y5U5 241 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 TRBV7-1A0A0A6YYK4 115 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 LY6G6EA0A0G2JKS1 128 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 UBE2L6O14933 153 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 U3KQA8 63 aa9.59□□□□□ -0.87
CDC42BPA-202ENST00000366764 NDUFA3O95167 84 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 RRN3P1Q2M238 152 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 APOMO95445 188 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 IFI27P40305 119 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 WFDC3Q8IUB2 231 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 HOXA3O43365 443 aaPredicted RBP9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 GGTLC3B5MD39 225 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF138P52744 262 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 AGRNO00468 2067 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 RPL15P61313 204 aaKnown RBP9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 BUB1B-PAK6H3BSN5 160 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 C15orf32Q32M92 178 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 C9orf139Q6ZV77 190 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 SELLP14151 372 aa9.58□□□□□ -0.88
CDC42BPA-202ENST00000366764 PTPRBP23467 1997 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 ATP5J2P56134 94 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 MEGF9Q9H1U4 602 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 A0A1W2PPI3 338 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 HAX1O00165 279 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF418Q8TF45 676 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 TMEM238C9JI98 176 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 LYZL1Q6UWQ5 148 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 KIR3DS1Q14943 382 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 C10orf55Q5SWW7 151 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 LSM4Q9Y4Z0 139 aaKnown RBP9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 BOD1L2Q8IYS8 172 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 DLX4Q92988 240 aaPredicted RBP9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 ABCA2Q9BZC7 2435 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 NPFFO15130 113 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGLV1-44P01699 117 aa9.57□□□□□ -0.88
CDC42BPA-202ENST00000366764 SMAD7O15105 426 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 ESDP10768 282 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF474Q6S9Z5 364 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 THAP8Q8NA92 274 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 MUC21A0A0G2JKD1 596 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 MUC21A0A140T8X8 626 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 TFF1P04155 84 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 KLF5Q13887 457 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 MUC21Q5SSG8 566 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 BCL6BQ8N143 479 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 TPTE2P1Q5T6R2 138 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 CLEC19AQ6UXS0 136 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 RNF182Q8N6D2 247 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 ABHD17AQ96GS6 310 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 CYYR1Q96J86 154 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRSS46E5RG02 174 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 LINC00477Q96M19 166 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 DUSP14O95147 198 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 TEX36Q5VZQ5 186 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 IGHV3-35A0A0C4DH35 117 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 WDR86Q86TI4 376 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 LINC01560Q8TB33 94 aa9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 RNASE4P34096 147 aaKnown RBP9.56□□□□□ -0.88
CDC42BPA-202ENST00000366764 A8MWV9 139 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 NPIPB5A8MRT5 1133 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 THBDP07204 575 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF815PA8K554 130 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PAX8Q06710 450 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 MOB4Q9Y3A3 225 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRR20EP86478 221 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRR20CP86479 221 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRR20DP86480 221 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRR20BP86481 221 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 PRR20AP86496 221 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 SLAQ13239 276 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 OCIAD2Q56VL3 154 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 A0A087X0K7 114 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 SH2D1AO60880 128 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 TMEM155Q4W5P6 130 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 C5orf24Q7Z6I8 188 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 CD33P20138 364 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 SUMO2P61956 95 aaKnown RBP9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 TMEM105Q8N8V8 129 aa9.55□□□□□ -0.88
CDC42BPA-202ENST00000366764 VMO1Q7Z5L0 202 aa9.54□□□□□ -0.88
CDC42BPA-202ENST00000366764 MRAP2Q96G30 205 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 248.4 ms