RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 FAM169BQ8N8A8 192 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 MS4A6AQ9H2W1 248 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 IGHV2-26A0A0B4J1V2 119 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-201ENST00000361866 FABP5P3A8MUU1 101 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 DLX6P56179 175 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 PRSS57Q6UWY2 283 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 BCL6BQ8N143 479 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-201ENST00000361866 ARPC1AQ92747 370 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 TMEM131Q92545 1883 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 B9A039 149 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 NBR2O15453 112 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 BRWD1-AS2P59051 145 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 SEC11AP67812 179 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 TRGV9Q99603 122 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 MRPL16Q9NX20 251 aaKnown RBP11.21□□□□□ -0.62
COL6A1-201ENST00000361866 SIGLEC9Q9Y336 463 aa11.21□□□□□ -0.62
COL6A1-201ENST00000361866 TOMM40O96008 361 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 OR10J6PQ8NGY7 276 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 FAM57AQ8TBR7 257 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 LINC00527Q9UJ94 153 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 IGKV1OR2-108A0A075B7D4 117 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 TMEM178BH3BS89 294 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 LYRM7Q5U5X0 104 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 ZC2HC1AQ96GY0 325 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 VKORC1Q9BQB6 163 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 BEX4Q9NWD9 120 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-201ENST00000361866 PROP1O75360 226 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 KIR3DS1Q14943 382 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 LY6EQ16553 131 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 Q86TA4 180 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 GLMPQ8WWB7 406 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 KMT2EQ8IZD2 1858 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 IGHV1-3A0A0C4DH29 117 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 FAM231BA6NCW3 169 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 SCGB3A1Q96QR1 104 aa11.2□□□□□ -0.62
COL6A1-201ENST00000361866 MYO9AB2RTY4 2548 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 KLRD1Q13241 179 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 TMEM170BQ5T4T1 132 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 CDH23Q9H251 3354 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 CFAP54Q96N23 3096 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 A0A1B0GW15 77 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 IGHG3P01860 377 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 UTF1Q5T230 341 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 SAMD5Q5TGI4 173 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 FNDC10F2Z333 226 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 ADIPOQQ15848 244 aa11.19□□□□□ -0.62
COL6A1-201ENST00000361866 HSD52Q0P140 79 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 JMJD8Q96S16 334 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 SORL1Q92673 2214 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 XIRP2A4UGR9 3374 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 CEP295Q9C0D2 2601 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 TMEM238LA0A1B0GVL6 79 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 A6NJY4 79 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 DGAT2L7PQ6IED9 249 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 MTURNQ8N3F0 131 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 CD5LO43866 347 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 ATP5LO75964 103 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 RPL13AP40429 203 aaKnown RBP11.18□□□□□ -0.62
COL6A1-201ENST00000361866 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 PVRIGQ6DKI7 326 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 OR4X2Q8NGF9 303 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 FXYD5Q96DB9 178 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 HCFC1P51610 2035 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 LTBP2Q14767 1821 aa11.18□□□□□ -0.62
COL6A1-201ENST00000361866 TMEM249Q2WGJ8 235 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 CLEC2AQ6UVW9 174 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 TP73-AS1Q9UF72 201 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 SH2D1AO60880 128 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.17□□□□□ -0.62
COL6A1-201ENST00000361866 IGHV3-11P01762 117 aa11.17□□□□□ -0.62
COL6A1-201ENST00000361866 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 IGFBPL1Q8WX77 278 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 C17orf77Q96MU5 243 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 NCOR2Q9Y618 2525 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 DPM2O94777 84 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 C8orf49Q96NF6 230 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 RAXQ9Y2V3 346 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 FAM231DQ6ZW35 169 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 ZNF479Q96JC4 524 aa11.16□□□□□ -0.62
COL6A1-201ENST00000361866 IGKCP01834 107 aa11.15□□□□□ -0.62
COL6A1-201ENST00000361866 DAZAP2Q15038 168 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-201ENST00000361866 PSG3Q16557 428 aa11.15□□□□□ -0.62
COL6A1-201ENST00000361866 IGF2RP11717 2491 aa11.15□□□□□ -0.62
COL6A1-201ENST00000361866 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-201ENST00000361866 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-201ENST00000361866 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-201ENST00000361866 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
COL6A1-201ENST00000361866 NACAE9PAV3 2078 aa11.15□□□□□ -0.62
COL6A1-201ENST00000361866 RHOGP84095 191 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 TTC32Q5I0X7 151 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 BVES-AS1Q5T3Y7 98 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 CDKN1BP46527 198 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 NUP210LQ5VU65 1888 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 E7EUB6 86 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 NXT2Q9NPJ8 142 aaKnown RBP11.14□□□□□ -0.63
COL6A1-201ENST00000361866 TRGV3P03979 118 aa11.14□□□□□ -0.63
COL6A1-201ENST00000361866 OR9G4Q8NGQ1 327 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms