RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 ZNF479Q96JC4 524 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 PRELID3AQ96N28 172 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 TMEM213A2RRL7 107 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 RBP4P02753 201 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 OR4X2Q8NGF9 303 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 SPAG8Q99932 426 aaPredicted RBP10.2□□□□□ -0.78
VAMP1-201ENST00000361716 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
VAMP1-201ENST00000361716 TMEM160Q9NX00 188 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 FOXA2Q9Y261 457 aaPredicted RBP10.2□□□□□ -0.78
VAMP1-201ENST00000361716 FXYD5Q96DB9 178 aa10.2□□□□□ -0.78
VAMP1-201ENST00000361716 RNASE2P10153 161 aaKnown RBP10.19□□□□□ -0.78
VAMP1-201ENST00000361716 CD59P13987 128 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 PRCDQ00LT1 54 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 IGHV1-18A0A0C4DH31 117 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 A0A1W2PNU3 283 aaPredicted RBP10.19□□□□□ -0.78
VAMP1-201ENST00000361716 DLL1O00548 723 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 CKS2P33552 79 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 OR9G4Q8NGQ1 327 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 NDFIP1Q9BT67 221 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 MRPL36Q9P0J6 103 aaKnown RBP10.19□□□□□ -0.78
VAMP1-201ENST00000361716 SS18L1O75177 396 aaPredicted RBP10.19□□□□□ -0.78
VAMP1-201ENST00000361716 KIR2DS2P43631 304 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 DIAPH2-AS1Q14236 149 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 RPRMLQ8N4K4 120 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 HIST1H4GQ99525 98 aa10.19□□□□□ -0.78
VAMP1-201ENST00000361716 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 E7EUB6 86 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 UPK2O00526 184 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 SPINK8P0C7L1 97 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 FGF6P10767 208 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 KIR2DL2P43627 348 aaPredicted RBP10.18□□□□□ -0.78
VAMP1-201ENST00000361716 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 BOD1L2Q8IYS8 172 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 SIGLEC8Q9NYZ4 499 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 RALYQ9UKM9 306 aaKnown RBP10.18□□□□□ -0.78
VAMP1-201ENST00000361716 COL5A1P20908 1838 aaPredicted RBP10.18□□□□□ -0.78
VAMP1-201ENST00000361716 IGHV3OR16-8A0A075B7F1 116 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 GAGE13Q4V321 117 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 FAM90A1Q86YD7 464 aa10.18□□□□□ -0.78
VAMP1-201ENST00000361716 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.78
VAMP1-201ENST00000361716 TCRAP04437 139 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 MZT1Q08AG7 82 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 MSMPQ1L6U9 139 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 OR5AN1Q8NGI8 311 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 IGHV3-35A0A0C4DH35 117 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 H3BVH4 76 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 APOMO95445 188 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 EVI2AP22794 236 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 COX7A1P24310 79 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 FAM27E3Q08E93 113 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 SYT8Q8NBV8 401 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 RNF7Q9UBF6 113 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 NPIPB6E9PJ23 425 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 CT45A10P0DMU9 189 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 OR1L8Q8NGR8 309 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 FAM222BQ8WU58 562 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 IGFBPL1Q8WX77 278 aa10.17□□□□□ -0.78
VAMP1-201ENST00000361716 AGRNO00468 2067 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 IGKV2D-26A0A0A0MRZ7 120 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 FAM90A9PA6NNJ1 464 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 TWIST1Q15672 202 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 FOXC2Q99958 501 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 SRRM5B3KS81 715 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 CNIH1O95406 144 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 LOXL3P58215 753 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 MBNL2Q5VZF2 373 aaKnown RBP10.16□□□□□ -0.78
VAMP1-201ENST00000361716 ZNF48Q96MX3 618 aaPredicted RBP10.16□□□□□ -0.78
VAMP1-201ENST00000361716 HBDP02042 147 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 APOBEC3AP31941 199 aaPredicted RBP10.16□□□□□ -0.78
VAMP1-201ENST00000361716 ABHD17AQ96GS6 310 aa10.16□□□□□ -0.78
VAMP1-201ENST00000361716 TCRBV4S1A1TA0A5B7 111 aa10.15□□□□□ -0.78
VAMP1-201ENST00000361716 GATA3P23771 443 aa10.15□□□□□ -0.78
VAMP1-201ENST00000361716 SUB1P53999 127 aaKnown RBP eCLIP10.15□□□□□ -0.78
VAMP1-201ENST00000361716 GLMPQ8WWB7 406 aa10.15□□□□□ -0.78
VAMP1-201ENST00000361716 FMC1Q96HJ9 113 aa10.15□□□□□ -0.78
VAMP1-201ENST00000361716 PLSCR4Q9NRQ2 329 aa10.15□□□□□ -0.78
VAMP1-201ENST00000361716 SPANXB1Q9NS25 103 aaPredicted RBP10.15□□□□□ -0.78
VAMP1-201ENST00000361716 TNFRSF1AP19438 455 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 ZC2HC1BQ5TFG8 222 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 RPUSD1Q9UJJ7 312 aaKnown RBP10.14□□□□□ -0.79
VAMP1-201ENST00000361716 TMEM238LA0A1B0GVL6 79 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 M0R3E3 92 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 C2orf83Q53S99 150 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 LYZL1Q6UWQ5 148 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 KLK15Q9H2R5 256 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 SOX21Q9Y651 276 aaPredicted RBP10.14□□□□□ -0.79
VAMP1-201ENST00000361716 C17orf58Q2M2W7 97 aa10.14□□□□□ -0.79
VAMP1-201ENST00000361716 LEPP41159 167 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 ORMDL3Q8N138 153 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 MDS2Q8NDY4 140 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 C17orf77Q96MU5 243 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 DYNLRB1Q9NP97 96 aa10.13□□□□□ -0.79
VAMP1-201ENST00000361716 NDUFA3O95167 84 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms