RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 SPTAN1Q13813 2472 aaKnown RBP8.86□□□□□ -0.99
CLIP1-203ENST00000361654 THAP8Q8NA92 274 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 Q8TAT8 98 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 SHANK2-AS3Q9BTD1 123 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 J3QRE1 110 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 YPEL3P61236 119 aaPredicted RBP8.86□□□□□ -0.99
CLIP1-203ENST00000361654 CFHR3Q02985 330 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 Q6P435 159 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 PLXNA1Q9UIW2 1896 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 PAX9P55771 341 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 RBBP6Q7Z6E9 1792 aaKnown RBP8.86□□□□□ -0.99
CLIP1-203ENST00000361654 A0A087WWL8 130 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 RNF126Q9BV68 326 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 TIMM21Q9BVV7 248 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 FNDC10F2Z333 226 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 F8VVB4 439 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 F8VWA3 439 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 SPINK13Q1W4C9 94 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 PIP4P1Q86T03 277 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 VPREB3Q9UKI3 123 aa8.86□□□□□ -0.99
CLIP1-203ENST00000361654 NRXN2Q9P2S2 1712 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 TMEM243Q9BU79 118 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 IGHV1OR15-1A0A075B7D0 117 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 D6R8Y8 96 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 SERF1AO75920 110 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 ADCYAP1P18509 176 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 KLF5Q13887 457 aaPredicted RBP8.85□□□□□ -0.99
CLIP1-203ENST00000361654 LHFPL4Q7Z7J7 247 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 DKK4Q9UBT3 224 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 IGKV1-27A0A075B6S5 117 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 A0A087WV48 116 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 NCR2O95944 276 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 NIT1Q86X76 327 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 GFI1Q99684 422 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 NDUFAF3Q9BU61 184 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 NCOR1P1Q9H4R4 102 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 TRAV3A0A0B4J244 114 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 LAMTOR2Q9Y2Q5 125 aa8.85□□□□□ -0.99
CLIP1-203ENST00000361654 TRAV8-4A0A0B4J246 113 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 UBE2BP63146 152 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 IL17DQ8TAD2 202 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 CLDN16Q9Y5I7 305 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 PIKFYVEQ9Y2I7 2098 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 A0A0A6YYD4 124 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 H3BUA1 57 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 DKK1O94907 266 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 BRCA1P38398 1863 aaKnown RBP8.84□□□□□ -0.99
CLIP1-203ENST00000361654 RNASE2P10153 161 aaKnown RBP8.84□□□□□ -0.99
CLIP1-203ENST00000361654 TMEM170AQ8WVE7 144 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 SPXQ9BT56 116 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 TRPM7Q96QT4 1865 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BKO60814 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BJP06899 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BOP23527 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BBP33778 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BDP58876 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 NPC2P61916 151 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BCP62807 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST2H2BEQ16778 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BHQ93079 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 MGST2Q99735 147 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BNQ99877 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 HIST1H2BMQ99879 126 aa8.84□□□□□ -0.99
CLIP1-203ENST00000361654 IGKV1D-8A0A087WSZ0 117 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 KNCNA6PVL3 124 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 CDKN1BP46527 198 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 RBMY1FQ15415 496 aaKnown RBP8.83□□□□□ -1
CLIP1-203ENST00000361654 SFTA2Q6UW10 78 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 ORAOV1Q8WV07 137 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 CCL18P55774 89 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 PYY3Q5JQD4 70 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 IGFL4Q6B9Z1 124 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 NYNRINQ9P2P1 1898 aaKnown RBP8.83□□□□□ -1
CLIP1-203ENST00000361654 H0YIZ8 118 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 ADMP35318 185 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 FOXL2NBQ6ZUU3 175 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 ANKRD36A6QL64 1941 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 G3V318 75 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 DMRTC2Q8IXT2 367 aaPredicted RBP8.83□□□□□ -1
CLIP1-203ENST00000361654 KLK5Q9Y337 293 aaPredicted RBP8.83□□□□□ -1
CLIP1-203ENST00000361654 A0A0G2JMZ2 1700 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 LRRC37A2A6NM11 1700 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 H3BUT2 72 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 CLPSP04118 112 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 TMEM14EPQ6UXP3 125 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 TMEM256Q8N2U0 113 aa8.83□□□□□ -1
CLIP1-203ENST00000361654 LINC00473A8K010 186 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 AGMATQ9BSE5 352 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 ARFGEF3Q5TH69 2177 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 RPRMLQ8N4K4 120 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 PNRC2Q9NPJ4 139 aaKnown RBP8.82□□□□□ -1
CLIP1-203ENST00000361654 PFN1P07737 140 aaKnown RBP8.82□□□□□ -1
CLIP1-203ENST00000361654 NBASA2RRP1 2371 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 A0A1W2PPI3 338 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 H3BMM0 161 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 CCL24O00175 119 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 ZNF114Q8NC26 417 aa8.82□□□□□ -1
CLIP1-203ENST00000361654 IGF2BP2-AS1Q96M15 143 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms