RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 LINC00869P0C866 280 aa14.64□□□□□ -0.07
CD47-202ENST00000361309 TNFSF8P32971 234 aa14.64□□□□□ -0.07
CD47-202ENST00000361309 PLP1P60201 277 aa14.64□□□□□ -0.07
CD47-202ENST00000361309 RPUSD4Q96CM3 377 aaKnown RBP14.64□□□□□ -0.07
CD47-202ENST00000361309 MRPS26Q9BYN8 205 aaKnown RBP14.64□□□□□ -0.07
CD47-202ENST00000361309 Q9H3A6 140 aa14.64□□□□□ -0.07
CD47-202ENST00000361309 A0A0J9YY99 117 aa14.63□□□□□ -0.07
CD47-202ENST00000361309 H7BYZ3 331 aa14.63□□□□□ -0.07
CD47-202ENST00000361309 PPP1R1AQ13522 171 aa14.63□□□□□ -0.07
CD47-202ENST00000361309 RXFP4Q8TDU9 374 aa14.63□□□□□ -0.07
CD47-202ENST00000361309 ZNF701M0R085 212 aaPredicted RBP14.62□□□□□ -0.07
CD47-202ENST00000361309 M6PRP20645 277 aa14.62□□□□□ -0.07
CD47-202ENST00000361309 KIR3DS1Q14943 382 aa14.62□□□□□ -0.07
CD47-202ENST00000361309 ESRGQ1W209 222 aa14.62□□□□□ -0.07
CD47-202ENST00000361309 RAB2BQ8WUD1 216 aa14.62□□□□□ -0.07
CD47-202ENST00000361309 HOXA5P20719 270 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 SELENOTP62341 195 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 POLR2GP62487 172 aaKnown RBP eCLIP14.61□□□□□ -0.07
CD47-202ENST00000361309 DLK1P80370 383 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 PATE2Q6UY27 113 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 TOMM5Q8N4H5 51 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 LINC00612Q8N6U2 182 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 TRIM63Q969Q1 353 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 ZNF503Q96F45 646 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 UPK3BQ9BT76 320 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 PARD6GQ9BYG4 376 aaPredicted RBP14.61□□□□□ -0.07
CD47-202ENST00000361309 SLIRPQ9GZT3 109 aaKnown RBP14.61□□□□□ -0.07
CD47-202ENST00000361309 ARL6Q9H0F7 186 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 PSENENQ9NZ42 101 aa14.61□□□□□ -0.07
CD47-202ENST00000361309 HERC1Q15751 4861 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 GAGE12BA1L429 117 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 PMS2P5A8MQ11 134 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 MRPS12O15235 138 aaKnown RBP14.6□□□□□ -0.07
CD47-202ENST00000361309 ADAP1O75689 374 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 GAGE7O76087 117 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 GAGE12FP0CL80 117 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 GAGE12GP0CL81 117 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 GAGE12IP0CL82 117 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 ANXA7P20073 488 aaKnown RBP14.6□□□□□ -0.07
CD47-202ENST00000361309 BTF3P20290 206 aaKnown RBP14.6□□□□□ -0.07
CD47-202ENST00000361309 AP3S2P59780 193 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 ID3Q02535 119 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 S100A7AQ86SG5 101 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 C20orf144Q9BQM9 153 aa14.6□□□□□ -0.07
CD47-202ENST00000361309 SLC25A21Q9BQT8 299 aaPredicted RBP14.6□□□□□ -0.07
CD47-202ENST00000361309 A0A1W2PPQ1 181 aa14.59□□□□□ -0.07
CD47-202ENST00000361309 CCNKO75909 580 aa14.59□□□□□ -0.07
CD47-202ENST00000361309 SNRPCP09234 159 aaKnown RBP14.59□□□□□ -0.07
CD47-202ENST00000361309 RRAS2P62070 204 aaPredicted RBP14.59□□□□□ -0.07
CD47-202ENST00000361309 ARV1Q9H2C2 271 aa14.59□□□□□ -0.07
CD47-202ENST00000361309 RLN2P04090 185 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 CXCL2P19875 107 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 PYDC2Q56P42 97 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 GFI1BQ5VTD9 330 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 CCDC28AQ8IWP9 274 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 MCFD2Q8NI22 146 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 ZNF331Q9NQX6 463 aaPredicted RBP14.58□□□□□ -0.08
CD47-202ENST00000361309 ZNF586Q9NXT0 402 aa14.58□□□□□ -0.08
CD47-202ENST00000361309 MRPS16Q9Y3D3 137 aaKnown RBP14.58□□□□□ -0.08
CD47-202ENST00000361309 TMBIM6P55061 237 aa14.57□□□□□ -0.08
CD47-202ENST00000361309 LCN15Q6UWW0 184 aa14.57□□□□□ -0.08
CD47-202ENST00000361309 BCL7BQ9BQE9 202 aa14.57□□□□□ -0.08
CD47-202ENST00000361309 SNURFLB1AK76 121 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 PRAC2D3DTV9 90 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 H3BNG1 76 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 SSSCA1O60232 199 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 SLC38A11Q08AI6 406 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 CCDC190Q86UF4 302 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 SMIM8Q96KF7 97 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 SLC50A1Q9BRV3 221 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 NPVFQ9HCQ7 196 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 RNF24Q9Y225 148 aa14.56□□□□□ -0.08
CD47-202ENST00000361309 K7EPK0 472 aa14.55□□□□□ -0.08
CD47-202ENST00000361309 METTL15P1P0C7V9 234 aa14.55□□□□□ -0.08
CD47-202ENST00000361309 TEPPQ6URK8 271 aa14.55□□□□□ -0.08
CD47-202ENST00000361309 LINC00305Q7Z4B0 112 aa14.55□□□□□ -0.08
CD47-202ENST00000361309 FNDC10F2Z333 226 aa14.54□□□□□ -0.08
CD47-202ENST00000361309 H3BTX0 84 aa14.54□□□□□ -0.08
CD47-202ENST00000361309 J3KRW8 73 aa14.54□□□□□ -0.08
CD47-202ENST00000361309 TMEM14EPQ6UXP3 125 aa14.54□□□□□ -0.08
CD47-202ENST00000361309 TMPRSS5Q9H3S3 457 aa14.54□□□□□ -0.08
CD47-202ENST00000361309 C9orf170A2RU37 121 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 EPM2AB3EWF7 344 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 SLC17A3O00476 420 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 LINC00315P59091 139 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 PXDC1Q5TGL8 231 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 BPIFA4PQ86YQ2 179 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 OR10P1Q8NGE3 313 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 MGAT4CQ9UBM8 478 aa14.53□□□□□ -0.08
CD47-202ENST00000361309 DMBT1Q9UGM3 2413 aaPredicted RBP14.53□□□□□ -0.08
CD47-202ENST00000361309 TRAV12-3A0A0B4J271 114 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 H3BMQ9 156 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 GOSR2O14653 212 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 UBE2MP61081 183 aaKnown RBP14.52□□□□□ -0.09
CD47-202ENST00000361309 Q6ZTI0 123 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 ZBTB8BQ8NAP8 495 aaPredicted RBP14.52□□□□□ -0.09
CD47-202ENST00000361309 DEDD2Q8WXF8 326 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 V9GYH0 126 aa14.52□□□□□ -0.09
CD47-202ENST00000361309 A0A096LPF7 62 aa14.51□□□□□ -0.09
CD47-202ENST00000361309 LINC00854A0A1B0GVQ3 168 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms