RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 S4R3C0 116 aa8.34□□□□□ -1.07
TRAPPC4-201ENST00000359005 PKD1L1Q8TDX9 2849 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 TRBV19A0A075B6N1 114 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 IGHV3-23P01764 117 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 CRYBA1P05813 215 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 USF2Q15853 346 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 MORN5Q5VZ52 161 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF343Q6P1L6 599 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 TOMM20LQ6UXN7 152 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF418Q8TF45 676 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 SLC50A1Q9BRV3 221 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 Q9H3A6 140 aa8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 PEF1Q9UBV8 284 aaKnown RBP8.33□□□□□ -1.08
TRAPPC4-201ENST00000359005 PLXNB1O43157 2135 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 GGTLC3B5MD39 225 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 ADMP35318 185 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 RAB5BP61020 215 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 CFHR3Q02985 330 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 TMEM183BQ1AE95 376 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 OR4X2Q8NGF9 303 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 C2CD4CQ8TF44 421 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 ISOC2Q96AB3 205 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 SFRP2Q96HF1 295 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 MLXQ9UH92 298 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 LINC00527Q9UJ94 153 aa8.32□□□□□ -1.08
TRAPPC4-201ENST00000359005 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 IGLC2P0DOY2 106 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 PSMB8P28062 276 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 MYCNOSP40205 109 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 ERVFC1-1P60608 527 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 CENPWQ5EE01 88 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 LEMD1Q68G75 181 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 Q8N2B8 174 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 OR10G8Q8NGN5 311 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF586Q9NXT0 402 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 UFC1Q9Y3C8 167 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 KLF12Q9Y4X4 402 aa8.31□□□□□ -1.08
TRAPPC4-201ENST00000359005 A0A087X0K7 114 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 C1orf196B1AJZ1 125 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 K7EMT4 169 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 BUB3O43684 328 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 TCRAP04437 139 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 FOLR2P14207 255 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 C12orf54Q6X4T0 127 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 OCC1Q8TAD7 63 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 WFDC12Q8WWY7 111 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 DAZAP1Q96EP5 407 aaKnown RBP8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF414Q96IQ9 312 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 UBE2E2Q96LR5 201 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 OSTCQ9NRP0 149 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZFP30Q9Y2G7 519 aa8.3□□□□□ -1.08
TRAPPC4-201ENST00000359005 TRBV24-1A0A075B6N3 115 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 DNAJC9-AS1A6NH13 148 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 COLCA2A8K830 154 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 HAX1O00165 279 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 ISLRO14498 428 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 MGST1P10620 155 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 RAB5AP20339 215 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 FOXL1Q12952 345 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 RPEL1Q2QD12 228 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 COX19Q49B96 90 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 GPHB5Q86YW7 130 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 FAM24BQ8N5W8 94 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 RNF152Q8N8N0 203 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 TMEM75Q8N9X5 138 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 NDFIP1Q9BT67 221 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 DERL1Q9BUN8 251 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF702PQ9H963 129 aa8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 DAZ1Q9NQZ3 744 aaKnown RBP8.29□□□□□ -1.08
TRAPPC4-201ENST00000359005 MEGF8Q7Z7M0 2845 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 PPP5D1E7EU14 171 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 M0QZ24 198 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 GCGP01275 180 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 ELOBQ15370 118 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 SAPCD1Q5SSQ6 148 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 IBA57Q5T440 356 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 SIGLEC15Q6ZMC9 328 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 FAM231DQ6ZW35 169 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 RPH3ALQ9UNE2 315 aa8.28□□□□□ -1.08
TRAPPC4-201ENST00000359005 ZNF320A2RRD8 509 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 IGHV3-11P01762 117 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 LGALS1P09382 135 aaKnown RBP8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 CT45A10P0DMU9 189 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 FLI1Q01543 452 aaPredicted RBP8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 C1QL4Q86Z23 238 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 FAM210BQ96KR6 192 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 IGF2BP2-AS1Q96M15 143 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 U3KQE9 123 aa8.27□□□□□ -1.09
TRAPPC4-201ENST00000359005 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
TRAPPC4-201ENST00000359005 IGHV3-35A0A0C4DH35 117 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms