RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 YPEL3P61236 119 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF415Q09FC8 603 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 Q0VG73 95 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 C1orf147Q96MC9 270 aaPredicted RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 CEP295Q9C0D2 2601 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 PTPN13Q12923 2485 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 CFHR2P36980 270 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 LCN12Q6JVE5 192 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF562Q6V9R5 426 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 TMEM14BQ9NUH8 114 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 RANBP2P49792 3224 aaKnown RBP9.55□□□□□ -0.88
COL9A1-202ENST00000357250 MALP21145 153 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 IGFL3Q6UXB1 125 aa9.55□□□□□ -0.88
COL9A1-202ENST00000357250 A8MWV9 139 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 SH2D1AO60880 128 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 RPL36AP83881 106 aaKnown RBP9.54□□□□□ -0.88
COL9A1-202ENST00000357250 PAX2Q02962 417 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 LINC00311Q8N616 119 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 RPL36ALQ969Q0 106 aaKnown RBP9.54□□□□□ -0.88
COL9A1-202ENST00000357250 PRADC1Q9BSG0 188 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 C1QTNF4Q9BXJ3 329 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.54□□□□□ -0.88
COL9A1-202ENST00000357250 PPIFP30405 207 aaKnown RBP9.54□□□□□ -0.88
COL9A1-202ENST00000357250 Q86TA4 180 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 ZNF329Q86UD4 541 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 BRCA2P51587 3418 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 RPL15P61313 204 aaKnown RBP9.54□□□□□ -0.88
COL9A1-202ENST00000357250 GTSCR1Q86UQ5 136 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 ERG28Q9UKR5 140 aa9.54□□□□□ -0.88
COL9A1-202ENST00000357250 IGKV1-6A0A0C4DH72 117 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 ADARB2-AS1A8MUL3 147 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 EVI2AP22794 236 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 KLF17Q5JT82 389 aaPredicted RBP9.53□□□□□ -0.88
COL9A1-202ENST00000357250 GFI1BQ5VTD9 330 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 TRAV8-2A0A0B4J237 113 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 MST1LQ2TV78 715 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 SYS1-DBNDD2H3BUS1 97 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 ATXN8Q156A1 80 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 SAMD5Q5TGI4 173 aa9.53□□□□□ -0.88
COL9A1-202ENST00000357250 SRRM4A7MD48 611 aaKnown RBP9.52□□□□□ -0.88
COL9A1-202ENST00000357250 TMEM75Q8N9X5 138 aa9.52□□□□□ -0.88
COL9A1-202ENST00000357250 DPH3Q96FX2 82 aa9.52□□□□□ -0.88
COL9A1-202ENST00000357250 COL4A3Q01955 1670 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 H3BUX3 64 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 RCHY1Q96PM5 261 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 DOCK11Q5JSL3 2073 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 FAM110DQ8TAY7 271 aaPredicted RBP9.52□□□□□ -0.89
COL9A1-202ENST00000357250 PLXNB3Q9ULL4 1909 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 TRAV2A0A0B4J234 112 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 RASL10AQ92737 203 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 PROK2Q9HC23 129 aa9.52□□□□□ -0.89
COL9A1-202ENST00000357250 PYY3Q5JQD4 70 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 FNDC4Q9H6D8 234 aaPredicted RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 NDUFA4L2Q9NRX3 87 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 TLN1Q9Y490 2541 aaKnown RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 A0A1W2PPI3 338 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 UBE2E1P51965 193 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 KLRD1Q13241 179 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 TMEM256Q8N2U0 113 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 DAZ1Q9NQZ3 744 aaKnown RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 ANKHD1Q8IWZ3 2542 aaKnown RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 MALRD1Q5VYJ5 2156 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 CD300EQ496F6 205 aaPredicted RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 ZNF833PQ6ZTB9 187 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 FAM231DQ6ZW35 169 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 A0A1W2PRX2 142 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 M0R2P5 195 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
COL9A1-202ENST00000357250 ZNF876PQ49A33 203 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 MSRB2Q9Y3D2 182 aa9.51□□□□□ -0.89
COL9A1-202ENST00000357250 MYO18BQ8IUG5 2567 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 E7EQL1 145 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 CRPP02741 224 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 IGKV1-16P04430 117 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 GGTLC3B5MD39 225 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 CEACAM8P31997 349 aaPredicted RBP9.5□□□□□ -0.89
COL9A1-202ENST00000357250 IGLV3-1P01715 115 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 GUSBP1Q15486 140 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 BCL6BQ8N143 479 aaPredicted RBP9.5□□□□□ -0.89
COL9A1-202ENST00000357250 HS3ST6Q96QI5 342 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 MEGF9Q9H1U4 602 aa9.5□□□□□ -0.89
COL9A1-202ENST00000357250 NCR2O95944 276 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 INSP01308 110 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 CD33P20138 364 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 TEX36Q5VZQ5 186 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 LYPD2Q6UXB3 125 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 SIGMAR1Q99720 223 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 C20orf144Q9BQM9 153 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 RHPN1-AS1Q9BWJ2 59 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 RHODO00212 210 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 DLEU1O43261 78 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 IGLV1-44P01699 117 aa9.49□□□□□ -0.89
COL9A1-202ENST00000357250 ZNF688P0C7X2 276 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms