RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PLPPR1Q8TBJ4 325 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 APOC4P55056 127 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 SEC11AP67812 179 aa14.19□□□□□ -0.14
COL27A1-201ENST00000356083 BCL6BQ8N143 479 aaPredicted RBP14.19□□□□□ -0.14
COL27A1-201ENST00000356083 IGHMP01871 453 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 RPL18AQ02543 176 aaKnown RBP14.18□□□□□ -0.14
COL27A1-201ENST00000356083 IGHV4-28A0A0C4DH34 117 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 hDV102S1A0JD36 115 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 C4orf51C9J302 202 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 FAM90A9PA6NNJ1 464 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 SOCS3O14543 225 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 IGHV1-46P01743 117 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 EFNA4P52798 201 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 LYZL1Q6UWQ5 148 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 ZNF497Q6ZNH5 498 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 CCL20P78556 96 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 TRBV25-1A0A075B6N4 114 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 TRBV5-7A0A0A0MS05 114 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 VWC2Q2TAL6 325 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 MRPL52Q86TS9 123 aaKnown RBP14.18□□□□□ -0.14
COL27A1-201ENST00000356083 KLK9Q9UKQ9 250 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 PAX9P55771 341 aa14.18□□□□□ -0.14
COL27A1-201ENST00000356083 IRF3Q14653 427 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 OBSL1O75147 1896 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 C1QTNF5Q9BXJ0 243 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 FOXG1P55316 489 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-201ENST00000356083 PIN1P1O15428 100 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 SAA4P35542 130 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 TRPM3Q9HCF6 1732 aaPredicted RBP14.17□□□□□ -0.14
COL27A1-201ENST00000356083 FAM90A2PQ658T7 463 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 ATP6V0BQ99437 205 aa14.17□□□□□ -0.14
COL27A1-201ENST00000356083 COL22A1Q8NFW1 1626 aaPredicted RBP14.16□□□□□ -0.14
COL27A1-201ENST00000356083 CCDC168Q8NDH2 2452 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 A6NNC1 897 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 TMEM158Q8WZ71 300 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 IGHV1-3A0A0C4DH29 117 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 GAS1P54826 345 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 LIME1Q9H400 295 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 MORN5Q5VZ52 161 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 OVOL2Q9BRP0 275 aa14.16□□□□□ -0.14
COL27A1-201ENST00000356083 EML5Q05BV3 1969 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 PQLC2LA1A4F0 135 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 PRSS29PA6NIE9 313 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 TMEM14DPA8MWL7 114 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 TRAV12-2A0A075B6T6 113 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 SH2D1AO60880 128 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 Q0VFX4 171 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 EFNA2O43921 213 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 SRP19P09132 144 aaKnown RBP14.15□□□□□ -0.14
COL27A1-201ENST00000356083 EXPH5Q8NEV8 1989 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 IGKV1D-13A0A0B4J2D9 117 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 IGKV1-13P0DP09 117 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 C20orf204Q6ZNR8 217 aa14.15□□□□□ -0.14
COL27A1-201ENST00000356083 A0A0G2JNJ9 132 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 A0A0J9YY99 117 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 Q9UFV3 132 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 LY75O60449 1722 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 A0A1W2PRE2 83 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 RHPN1-AS1Q9BWJ2 59 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 UBE2E1P51965 193 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 GUSBP1Q15486 140 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 TINCRA0A1B0GVN0 87 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 NPDC1Q9NQX5 325 aaPredicted RBP14.14□□□□□ -0.15
COL27A1-201ENST00000356083 IGKV1-39P01597 117 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 IGKV1D-39P04432 117 aa14.14□□□□□ -0.15
COL27A1-201ENST00000356083 DUTP33316 252 aaKnown RBP14.13□□□□□ -0.15
COL27A1-201ENST00000356083 TCF15Q12870 199 aa14.13□□□□□ -0.15
COL27A1-201ENST00000356083 RTBDNQ9BSG5 229 aaPredicted RBP14.13□□□□□ -0.15
COL27A1-201ENST00000356083 C9orf153Q5TBE3 101 aa14.13□□□□□ -0.15
COL27A1-201ENST00000356083 PSG3Q16557 428 aa14.13□□□□□ -0.15
COL27A1-201ENST00000356083 J3QKU1 62 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 FAM90A1Q86YD7 464 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 RBM38Q9H0Z9 239 aaKnown RBP14.12□□□□□ -0.15
COL27A1-201ENST00000356083 CEP192Q8TEP8 1941 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 IGHG4P01861 327 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 CHCHD1Q96BP2 118 aaKnown RBP14.12□□□□□ -0.15
COL27A1-201ENST00000356083 TMEM131Q92545 1883 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 IGHV1-8P0DP01 117 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 FNDC1Q4ZHG4 1894 aaPredicted RBP14.12□□□□□ -0.15
COL27A1-201ENST00000356083 RMI2Q96E14 147 aa14.12□□□□□ -0.15
COL27A1-201ENST00000356083 CD5P06127 495 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 RNASE13Q5GAN3 156 aaKnown RBP14.11□□□□□ -0.15
COL27A1-201ENST00000356083 TMEM178BH3BS89 294 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 INAFM2P0DMQ5 153 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 USMG5Q96IX5 58 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 TM2D1Q9BX74 207 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 BUB3O43684 328 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 HSD52Q0P140 79 aa14.11□□□□□ -0.15
COL27A1-201ENST00000356083 OVOL3O00110 214 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 NBL1P41271 181 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 WBP1Q96G27 269 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 GNB1LQ9BYB4 327 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 CFHR2P36980 270 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 MESP1Q9BRJ9 268 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 UBL5Q9BZL1 73 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 PLXNB3Q9ULL4 1909 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 XCL1P47992 114 aa14.1□□□□□ -0.15
COL27A1-201ENST00000356083 SUPT4H1P63272 117 aaKnown RBP14.1□□□□□ -0.15
COL27A1-201ENST00000356083 MRPL14Q6P1L8 145 aaKnown RBP14.1□□□□□ -0.15
COL27A1-201ENST00000356083 C14orf132Q9NPU4 83 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms