RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 MAP6D1Q9H9H5 199 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 UBQLN2Q9UHD9 624 aa11.58□□□□□ -0.56
TRIM13-201ENST00000356017 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 FAM24BQ8N5W8 94 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 RAB24Q969Q5 203 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 C17orf77Q96MU5 243 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 SLC50A1Q9BRV3 221 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 TUBA4BQ9H853 241 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 A8MZ25 164 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 H3BQ15 152 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 ZNF253O75346 499 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 DEFB131AP59861 70 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 PDE6HQ13956 83 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 PSMG4Q5JS54 123 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 RNF141Q8WVD5 230 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
TRIM13-201ENST00000356017 NBEAP1P0C6P0 100 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 STAG3L2P0CL84 134 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 STAG3L3P0CL85 134 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 IGHV4-30-4P0DP06 118 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 PYYP10082 97 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 DEFB125Q8N687 156 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 TMED6Q8WW62 240 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 LINC00052Q96N35 136 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 ZNF331Q9NQX6 463 aaPredicted RBP11.56□□□□□ -0.56
TRIM13-201ENST00000356017 ZNF586Q9NXT0 402 aa11.56□□□□□ -0.56
TRIM13-201ENST00000356017 TRBV19A0A075B6N1 114 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 CTXND1A0A1B0GTU2 59 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 RAB5CP51148 216 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 UBE2L3P68036 154 aaKnown RBP11.55□□□□□ -0.56
TRIM13-201ENST00000356017 SAT2Q96F10 170 aaPredicted RBP11.55□□□□□ -0.56
TRIM13-201ENST00000356017 SRD5A3Q9H8P0 318 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
TRIM13-201ENST00000356017 CXorf1O96002 111 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
TRIM13-201ENST00000356017 OR10J4P0C629 311 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 PSG9Q00887 426 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 FXYD5Q96DB9 178 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 WFDC10AQ9H1F0 79 aa11.54□□□□□ -0.56
TRIM13-201ENST00000356017 HMGB3O15347 200 aaKnown RBP11.53□□□□□ -0.56
TRIM13-201ENST00000356017 BLNKQ8WV28 456 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 ZNF503Q96F45 646 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 PHYHIPLQ96FC7 376 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 H3BTX0 84 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 ARL14EPLP0DKL9 152 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 AAMDCQ9H7C9 122 aa11.53□□□□□ -0.56
TRIM13-201ENST00000356017 SLC17A3O00476 420 aa11.52□□□□□ -0.57
TRIM13-201ENST00000356017 ZNF726P1Q15940 193 aa11.52□□□□□ -0.57
TRIM13-201ENST00000356017 PSG3Q16557 428 aa11.52□□□□□ -0.57
TRIM13-201ENST00000356017 LYPD1Q8N2G4 141 aa11.52□□□□□ -0.57
TRIM13-201ENST00000356017 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.57
TRIM13-201ENST00000356017 EIF3GO75821 320 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIM13-201ENST00000356017 NDUFB4O95168 129 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 FHITP49789 147 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 IGFL4Q6B9Z1 124 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 EBLN2Q6P2I7 272 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 FOXI2Q6ZQN5 318 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 STHQ8IWL8 128 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 RNF182Q8N6D2 247 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 ZNF738Q8NE65 137 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 FAM213BQ8TBF2 198 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 CITED4Q96RK1 184 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 PRELID1Q9Y255 219 aa11.51□□□□□ -0.57
TRIM13-201ENST00000356017 LOC102724200A0A096LPH7 203 aaPredicted RBP11.5□□□□□ -0.57
TRIM13-201ENST00000356017 MAP1LC3B2A6NCE7 125 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 FRMD6-AS1P0C7T7 363 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 GCHFRP30047 84 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 SULT1A2P50226 295 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 ZNF124Q15973 351 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 ACTL10Q5JWF8 245 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 SSX7Q7RTT5 188 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 MRPL53Q96EL3 112 aaKnown RBP11.5□□□□□ -0.57
TRIM13-201ENST00000356017 C20orf173Q96LM9 149 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 MAP1LC3BQ9GZQ8 125 aa11.5□□□□□ -0.57
TRIM13-201ENST00000356017 H2AFB1P0C5Y9 115 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 RANP62826 216 aaKnown RBP11.49□□□□□ -0.57
TRIM13-201ENST00000356017 LINC00322Q6ZN03 302 aaPredicted RBP11.49□□□□□ -0.57
TRIM13-201ENST00000356017 SUN5Q8TC36 379 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 SFT2D1Q8WV19 159 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 SAV1Q9H4B6 383 aaPredicted RBP11.49□□□□□ -0.57
TRIM13-201ENST00000356017 FBN3Q75N90 2809 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 KNCNA6PVL3 124 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 HLA-DRB4P13762 266 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 FAM74A1Q5RGS3 127 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 IQCF2Q8IXL9 164 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 RPUSD4Q96CM3 377 aaKnown RBP11.49□□□□□ -0.57
TRIM13-201ENST00000356017 HLA-DRB4X5D2U9 266 aa11.49□□□□□ -0.57
TRIM13-201ENST00000356017 KIR2DL5BA0A0G2JN68 375 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 KIR2DL5BA0A0G2JPC4 375 aa11.48□□□□□ -0.57
TRIM13-201ENST00000356017 RBMY1BA6NDE4 496 aaKnown RBP11.48□□□□□ -0.57
TRIM13-201ENST00000356017 RBMY1EA6NEQ0 496 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms