RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 NPIPB6E9PJ23 425 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 GPHB5Q86YW7 130 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 OR4X2Q8NGF9 303 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
VPS13B-201ENST00000355155 PPP5D1E7EU14 171 aa13.21□□□□□ -0.3
VPS13B-201ENST00000355155 AAMDCQ9H7C9 122 aa13.21□□□□□ -0.3
VPS13B-201ENST00000355155 AURKAIP1Q9NWT8 199 aaPredicted RBP13.21□□□□□ -0.3
VPS13B-201ENST00000355155 RBAKDNA6NC62 111 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 PF4V1P10720 104 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 RPL15P61313 204 aaKnown RBP13.2□□□□□ -0.3
VPS13B-201ENST00000355155 PSG3Q16557 428 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 OR8I2Q8N0Y5 310 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 SIGLECL1Q8N7X8 197 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 ZNF785A8K8V0 405 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 RPS10P46783 165 aaKnown RBP13.2□□□□□ -0.3
VPS13B-201ENST00000355155 ERVFC1-1P60608 527 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 SLC35B1P78383 322 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 OR5I1Q13606 314 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 GNB4Q9HAV0 340 aa13.2□□□□□ -0.3
VPS13B-201ENST00000355155 K7EQM0 130 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 IBA57Q5T440 356 aaKnown RBP13.19□□□□□ -0.3
VPS13B-201ENST00000355155 PPP1R14DQ9NXH3 145 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
VPS13B-201ENST00000355155 TRAV34A0A0B4J273 112 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 C5orf52A6NGY3 159 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 GRAMD2BQ96HH9 432 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 NBPF19A0A087WUL8 3843 aa13.19□□□□□ -0.3
VPS13B-201ENST00000355155 TRBV12-3P01733 135 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 RPEL1Q2QD12 228 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 ACTL10Q5JWF8 245 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 SPG11Q96JI7 2443 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 H3BTX0 84 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 COX19Q49B96 90 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 WFDC12Q8WWY7 111 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 SERTAD4Q9NUC0 356 aa13.18□□□□□ -0.3
VPS13B-201ENST00000355155 CSMD2Q7Z408 3487 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 REC114Q7Z4M0 266 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 OR4B1Q8NGF8 309 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
VPS13B-201ENST00000355155 UBE2E2Q96LR5 201 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 FAM231BA6NCW3 169 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 TMEM95Q3KNT9 176 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 GOLT1AQ6ZVE7 132 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 NUDT10Q8NFP7 164 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 NUDT11Q96G61 164 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 GFRA4Q9GZZ7 299 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 RNASE7Q9H1E1 156 aaKnown RBP13.17□□□□□ -0.3
VPS13B-201ENST00000355155 PSG8Q9UQ74 426 aa13.17□□□□□ -0.3
VPS13B-201ENST00000355155 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 AKAP9Q99996 3911 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 LGALS9O00182 355 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 UBE2CO00762 179 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
VPS13B-201ENST00000355155 HNF1AP20823 631 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 CSN1S1P47710 185 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 A0A1W2PS18 150 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 LGALS1P09382 135 aaKnown RBP13.16□□□□□ -0.3
VPS13B-201ENST00000355155 UNQ9165/PRO28630Q6UXU0 137 aa13.16□□□□□ -0.3
VPS13B-201ENST00000355155 ZFHX3Q15911 3703 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 SNRPCP09234 159 aaKnown RBP13.15□□□□□ -0.3
VPS13B-201ENST00000355155 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 A0A1W2PPQ1 181 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 A8MWP6 167 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 SOCS3O14543 225 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 TRGC2P03986 189 aa13.15□□□□□ -0.3
VPS13B-201ENST00000355155 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
VPS13B-201ENST00000355155 GATCO43716 136 aaKnown RBP13.14□□□□□ -0.31
VPS13B-201ENST00000355155 MGST1P10620 155 aaKnown RBP13.14□□□□□ -0.31
VPS13B-201ENST00000355155 SRSF2Q01130 221 aaKnown RBP13.14□□□□□ -0.31
VPS13B-201ENST00000355155 TSKUQ8WUA8 353 aa13.14□□□□□ -0.31
VPS13B-201ENST00000355155 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 CHEK1O14757 476 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 SMAD7O15105 426 aaKnown RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 FOXA3P55318 350 aaPredicted RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 DOPEY2Q9Y3R5 2298 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 IGHV3-35A0A0C4DH35 117 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BKO60814 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BJP06899 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BOP23527 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BBP33778 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BDP58876 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BCP62807 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 RPL19P84098 196 aaKnown RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST2H2BEQ16778 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 SAMD13Q5VXD3 122 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BHQ93079 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BNQ99877 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 HIST1H2BMQ99879 126 aa13.13□□□□□ -0.31
VPS13B-201ENST00000355155 DAZ1Q9NQZ3 744 aaKnown RBP13.13□□□□□ -0.31
VPS13B-201ENST00000355155 M0R3E3 92 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 LINC00322Q6ZN03 302 aaPredicted RBP13.12□□□□□ -0.31
VPS13B-201ENST00000355155 ZFP82Q8N141 532 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 FRZBQ92765 325 aa13.12□□□□□ -0.31
VPS13B-201ENST00000355155 GNB1LQ9BYB4 327 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms