RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 hDV102S1A0JD36 115 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 A8MWV9 139 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 IL17RELQ6ZVW7 336 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 AMN1Q8IY45 258 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 LYPD1Q8N2G4 141 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 SPAG8Q99932 426 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-202ENST00000355133 SHANK2-AS3Q9BTD1 123 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 UBE2CO00762 179 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 GUSBP1Q15486 140 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 COLCA2A8K830 154 aa10.68□□□□□ -0.7
SCN8A-202ENST00000355133 A0A1B0GW64 132 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 TMEM256Q8N2U0 113 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 TMEM190Q8WZ59 177 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 G3V318 75 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 Q86TA4 180 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 MS4A6AQ9H2W1 248 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 LAMTOR3Q9UHA4 124 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 IGHV1-69DA0A0B4J2H0 117 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 IGHV1-69P01742 117 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 DUX4L9Q6RFH8 374 aaPredicted RBP10.67□□□□□ -0.7
SCN8A-202ENST00000355133 MPDZO75970 2070 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 NDUFB8O95169 186 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 RASL11AQ6T310 242 aa10.67□□□□□ -0.7
SCN8A-202ENST00000355133 BCL6BQ8N143 479 aaPredicted RBP10.67□□□□□ -0.7
SCN8A-202ENST00000355133 INS-IGF2F8WCM5 200 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 LINC01619G3V211 115 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 MYO7BQ6PIF6 2116 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 SPXQ9BT56 116 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 SRSF4Q08170 494 aaKnown RBP10.66□□□□□ -0.7
SCN8A-202ENST00000355133 ZNF562Q6V9R5 426 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 Q6ZS49 121 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 MCRIP2Q9BUT9 160 aaKnown RBP10.66□□□□□ -0.7
SCN8A-202ENST00000355133 COL6A6A6NMZ7 2263 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 ARMS2P0C7Q2 107 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 NCOR1O75376 2440 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 FAM110DQ8TAY7 271 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-202ENST00000355133 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-202ENST00000355133 TNFSF13O75888 250 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 GAGE13Q4V321 117 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 SPOCK3Q9BQ16 436 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 KLK9Q9UKQ9 250 aa10.66□□□□□ -0.7
SCN8A-202ENST00000355133 IGHV3-16A0A0C4DH30 117 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 IGKV1-6A0A0C4DH72 117 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 SSBP2P81877 361 aaPredicted RBP10.65□□□□□ -0.7
SCN8A-202ENST00000355133 SS18Q15532 418 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 LIME1Q9H400 295 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 GATA3P23771 443 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 LINC01559Q495D7 138 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 DOPEY2Q9Y3R5 2298 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 FER1L5A0AVI2 2057 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 CDK2AP2O75956 126 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 FHL1Q13642 323 aa10.65□□□□□ -0.7
SCN8A-202ENST00000355133 SEC11AP67812 179 aa10.65□□□□□ -0.71
SCN8A-202ENST00000355133 C8orf49Q96NF6 230 aa10.65□□□□□ -0.71
SCN8A-202ENST00000355133 SRSF8Q9BRL6 282 aaKnown RBP10.65□□□□□ -0.71
SCN8A-202ENST00000355133 LY6G6EA0A0G2JKS1 128 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 F5H768 121 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 C1orf122Q6ZSJ8 110 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 LY96Q9Y6Y9 160 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 U3KQA8 63 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE12JA6NER3 117 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 GATA4P43694 442 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE1Q13065 139 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE4Q13068 117 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 GAGE5Q13069 117 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 Q6ZR03 302 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 IGHV2-70DA0A0C4DH43 119 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 CR1LQ2VPA4 569 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 FAM90A2PQ658T7 463 aa10.64□□□□□ -0.71
SCN8A-202ENST00000355133 SPTBN1Q01082 2364 aaKnown RBP10.63□□□□□ -0.71
SCN8A-202ENST00000355133 ACACAQ13085 2346 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 A0A087X0K7 114 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 PRIMA1Q86XR5 153 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 ZNF625Q96I27 306 aaPredicted RBP10.63□□□□□ -0.71
SCN8A-202ENST00000355133 WISP1O95388 367 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 C3orf79P0CE67 100 aa10.63□□□□□ -0.71
SCN8A-202ENST00000355133 F8WEM9 126 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 LEPROTO15243 131 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 DAD1P61803 113 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 PROK2Q9HC23 129 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 TMEM213A2RRL7 107 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 CFHR2P36980 270 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 Q8TCH9 128 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 ANK1P16157 1881 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 HIST1H4AP62805 103 aaKnown RBP10.62□□□□□ -0.71
SCN8A-202ENST00000355133 FNDC10F2Z333 226 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 LY6G5BQ8NDX9 201 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 SBF1O95248 1867 aa10.62□□□□□ -0.71
SCN8A-202ENST00000355133 ZC2HC1BQ5TFG8 222 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 TRPT1Q86TN4 253 aaKnown RBP10.61□□□□□ -0.71
SCN8A-202ENST00000355133 ZNF503-AS2A6NEH8 195 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 SYS1-DBNDD2H3BUS1 97 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 ITGB1BP1O14713 200 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 PDE6HQ13956 83 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 NDUFA4L2Q9NRX3 87 aa10.61□□□□□ -0.71
SCN8A-202ENST00000355133 CACNA1BQ00975 2339 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms