RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 DOPEY1Q5JWR5 2465 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 LIMS1P48059 325 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 C3orf56Q8N813 242 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 AHDC1Q5TGY3 1603 aaPredicted RBP6.64□□□□□ -1.35
SCN8A-201ENST00000354534 CD200R1LQ6Q8B3 271 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 TAF1LQ8IZX4 1826 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 FAM236AA0A1B0GUQ0 79 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 FAM236BA0A1B0GV22 79 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 BAALC-AS2P0C853 105 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 UBE2BP63146 152 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 NDPQ00604 133 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 ATOX1O00244 68 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 FUSP35637 526 aaKnown RBP eCLIP6.64□□□□□ -1.35
SCN8A-201ENST00000354534 TMEM242Q9NWH2 141 aa6.64□□□□□ -1.35
SCN8A-201ENST00000354534 IGKV1D-16P01601 117 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 CDKN1AP38936 164 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 XIRP1Q702N8 1843 aaKnown RBP6.63□□□□□ -1.35
SCN8A-201ENST00000354534 K7ERJ3 54 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 RTBDNQ9BSG5 229 aaPredicted RBP6.63□□□□□ -1.35
SCN8A-201ENST00000354534 FNDC10F2Z333 226 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 NDUFB1O75438 58 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 FAM201AQ5SY85 155 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 NEU4Q8WWR8 484 aaPredicted RBP6.63□□□□□ -1.35
SCN8A-201ENST00000354534 TAX1BP3O14907 124 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 PYY3Q5JQD4 70 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 IGHMP01871 453 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 DEFB130BP0DP73 79 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 DEFB130AP0DP74 79 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 IL9P15248 144 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 DTX4Q9Y2E6 619 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 CENPVL1A0A0U1RR11 272 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 K7EP34 96 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 PRR4Q16378 134 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 SMRP1Q8NCR6 262 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 FREM1Q5H8C1 2179 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 C1QL2Q7Z5L3 287 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 TP53TG1Q9Y2A0 90 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 TEX48A0A1B0GUV7 120 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
SCN8A-201ENST00000354534 Q71RC1 249 aaPredicted RBP6.63□□□□□ -1.35
SCN8A-201ENST00000354534 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 MUC4Q99102 2169 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 KIAA1549Q9HCM3 1950 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 C18orf12Q96KH6 178 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 RNF126Q9BV68 326 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 TRBV25-1A0A075B6N4 114 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 CLPSL2Q6UWE3 100 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 FGF11Q92914 225 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 TIMM17AQ99595 171 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 IGHV3-16A0A0C4DH30 117 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 LOC101059948A0A1B0GTJ6 334 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 SAA2-SAA4A0A096LPE2 208 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 SAA2P0DJI9 122 aaPredicted RBP6.62□□□□□ -1.35
SCN8A-201ENST00000354534 CFHR2P36980 270 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 SPSB3Q6PJ21 355 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 IGHV4OR15-8A0A075B7B6 117 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 A0A087WW49 117 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 IGHV1-45A0A0A0MS14 117 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 FAM181AQ8N9Y4 354 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 TRPT1Q86TN4 253 aaKnown RBP6.62□□□□□ -1.35
SCN8A-201ENST00000354534 MLST8Q9BVC4 326 aa6.62□□□□□ -1.35
SCN8A-201ENST00000354534 GLI3P10071 1580 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 C12orf77C9JDV5 145 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 IGKV4-1P06312 121 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 Q8TAT8 98 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 ZNF831Q5JPB2 1677 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 CMC4P56277 68 aaPredicted RBP6.61□□□□□ -1.35
SCN8A-201ENST00000354534 MRPL27Q9P0M9 148 aaKnown RBP6.61□□□□□ -1.35
SCN8A-201ENST00000354534 POLR3KQ9Y2Y1 108 aaPredicted RBP6.61□□□□□ -1.35
SCN8A-201ENST00000354534 RNF222A6NCQ9 220 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 GZMMP51124 257 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 LINC00477Q96M19 166 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 M0R1W7 72 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 LINC00527Q9UJ94 153 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 PRSS29PA6NIE9 313 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 IGLC2P0DOY2 106 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 IGLC3P0DOY3 106 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 TRBV24-1A0A075B6N3 115 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 PRR19A6NJB7 356 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 ATP1A1-AS1Q5TC04 95 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
SCN8A-201ENST00000354534 ADAMTSL3P82987 1691 aa6.61□□□□□ -1.35
SCN8A-201ENST00000354534 CFHR4Q92496 578 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 COLCA2A8K830 154 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 F5H768 121 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 PRCDQ00LT1 54 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 NMSQ5H8A3 153 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 C1QTNF5Q9BXJ0 243 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 TET1Q8NFU7 2136 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 SRXN1Q9BYN0 137 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 IGLV1-36A0A0B4J1U3 117 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 SUPT4H1P63272 117 aaKnown RBP6.6□□□□□ -1.35
SCN8A-201ENST00000354534 MSRB2Q9Y3D2 182 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 BSPH1Q075Z2 132 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 TMEM14DPA8MWL7 114 aa6.6□□□□□ -1.35
SCN8A-201ENST00000354534 GREB1LQ9C091 1923 aaPredicted RBP6.6□□□□□ -1.35
SCN8A-201ENST00000354534 HLA-DRB4P13762 266 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 WIPF2Q8TF74 440 aaPredicted RBP6.59□□□□□ -1.35
SCN8A-201ENST00000354534 HLA-DRB4X5D2U9 266 aa6.59□□□□□ -1.35
SCN8A-201ENST00000354534 I3L3M4 83 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms