RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 GAGE12IP0CL82 117 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 CKS2P33552 79 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 GAGE4Q13068 117 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 ESPL1Q14674 2120 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 DGAT2L7PQ6IED9 249 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 A0A1B0GUS0 222 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 LINC00205P59089 165 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 PDE6HQ13956 83 aa9.78□□□□□ -0.84
SMAD9-201ENST00000350148 MMP23AO75900 390 aa9.77□□□□□ -0.84
SMAD9-201ENST00000350148 MUC6Q6W4X9 2439 aa9.77□□□□□ -0.84
SMAD9-201ENST00000350148 H3BUA1 57 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 PPP1R17O96001 155 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 PSMB11A5LHX3 300 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 RNASE1P07998 156 aaKnown RBP9.77□□□□□ -0.85
SMAD9-201ENST00000350148 VWC2Q2TAL6 325 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 TNFRSF6BO95407 300 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 WISP2O76076 250 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 MPV17L2Q567V2 206 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 CRIP3Q6Q6R5 217 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 SFTA2Q6UW10 78 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
SMAD9-201ENST00000350148 C22orf46C9J442 243 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 CD5LO43866 347 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 LEPP41159 167 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 TCF24Q7RTU0 167 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 DDB2Q92466 427 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 APC2O95996 2303 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 INS-IGF2F8WCM5 200 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 H3BTX0 84 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 TMEM160Q9NX00 188 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 S4R3C0 116 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 DOCK10Q96BY6 2186 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 MED13Q9UHV7 2174 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 HOXA3O43365 443 aaPredicted RBP9.76□□□□□ -0.85
SMAD9-201ENST00000350148 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 GAGE12HA6NDE8 117 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 ATP5LO75964 103 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 CD300EQ496F6 205 aaPredicted RBP9.76□□□□□ -0.85
SMAD9-201ENST00000350148 SPRNQ5BIV9 151 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 TEX38Q6PEX7 206 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 C9orf139Q6ZV77 190 aa9.76□□□□□ -0.85
SMAD9-201ENST00000350148 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 PYYP10082 97 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 ZNF114Q8NC26 417 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 SHANK2-AS3Q9BTD1 123 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 SPANXCQ9NY87 97 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 PSG8Q9UQ74 426 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 IFITM1P13164 125 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 ADMP35318 185 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 PMVKQ15126 192 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 TRBV24-1A0A075B6N3 115 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 A0A1B0GUT8 65 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 ATP5L2Q7Z4Y8 100 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 MSMPQ1L6U9 139 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 RASL11AQ6T310 242 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 NPBQ8NG41 125 aa9.75□□□□□ -0.85
SMAD9-201ENST00000350148 ZFHX2Q9C0A1 2572 aaPredicted RBP9.74□□□□□ -0.85
SMAD9-201ENST00000350148 HOXB4P17483 251 aaPredicted RBP9.74□□□□□ -0.85
SMAD9-201ENST00000350148 PRR31Q5SQ13 230 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 BRD3OSQ6XYD6 125 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 SIGLEC15Q6ZMC9 328 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 EML5Q05BV3 1969 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 IGHV3-35A0A0C4DH35 117 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 MRPS16Q9Y3D3 137 aaKnown RBP9.74□□□□□ -0.85
SMAD9-201ENST00000350148 GTF3C1Q12789 2109 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 FOXL1Q12952 345 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 PF4P02776 101 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 ASIPP42127 132 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 MS4A6AQ9H2W1 248 aa9.74□□□□□ -0.85
SMAD9-201ENST00000350148 K7EP13 123 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 IGHV3-11P01762 117 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 MGPP08493 103 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 SPATA31B1PQ5VZV4 182 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 SPXQ9BT56 116 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 ICE1Q9Y2F5 2266 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 TRAV2A0A0B4J234 112 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 IGHV4-39P01824 125 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 MEIG1Q5JSS6 88 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 TMEM219Q86XT9 240 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 TMEM14CQ9P0S9 112 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 ZNRD1Q9P1U0 126 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 FOXA3P55318 350 aaPredicted RBP9.73□□□□□ -0.85
SMAD9-201ENST00000350148 OCC1Q8TAD7 63 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 PSG3Q16557 428 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 TMEM256Q8N2U0 113 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 C10orf105Q8TEF2 133 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 CGB3P0DN86 165 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 CGB7P0DN87 165 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 CIRBPQ14011 172 aaKnown RBP9.73□□□□□ -0.85
SMAD9-201ENST00000350148 MUC21Q5SSG8 566 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 GAGE2AQ6NT46 116 aa9.73□□□□□ -0.85
SMAD9-201ENST00000350148 TCRAP04437 139 aa9.72□□□□□ -0.85
SMAD9-201ENST00000350148 CACNG7P62955 275 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms