RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 PIP4P1Q86T03 277 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 RND1Q92730 232 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 TRAV8-2A0A0B4J237 113 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 SMKR1H3BMG3 65 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 HOXA3O43365 443 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-203ENST00000349748 ERVK-16P61578 105 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 FLYWCH2Q96CP2 140 aaKnown RBP8.49□□□□□ -1.05
CAPN3-203ENST00000349748 PRDM14Q9GZV8 571 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 GFRA4Q9GZZ7 299 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 C12orf49Q9H741 205 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 LINC01549A6NIU2 74 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 CDX4O14627 284 aaPredicted RBP8.49□□□□□ -1.05
CAPN3-203ENST00000349748 SRSF1Q07955 248 aaKnown RBP eCLIP8.49□□□□□ -1.05
CAPN3-203ENST00000349748 RBMXL3Q8N7X1 1067 aaKnown RBP8.49□□□□□ -1.05
CAPN3-203ENST00000349748 FXYD5Q96DB9 178 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 COQ2Q96H96 371 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 RASL11BQ9BPW5 248 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 KLF12Q9Y4X4 402 aa8.49□□□□□ -1.05
CAPN3-203ENST00000349748 A0A0J9YW62 118 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 SMIM9A6NGZ8 99 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 TMEM262E9PQX1 116 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 PRSS1P07477 247 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 RPL39P5Q59GN2 51 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 SRSF12Q8WXF0 261 aaKnown RBP8.48□□□□□ -1.05
CAPN3-203ENST00000349748 TMEM158Q8WZ71 300 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 TMEM160Q9NX00 188 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 TNCP24821 2201 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 IGHV3-48P01763 117 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 IGKCP01834 107 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 RPL7P18124 248 aaKnown RBP8.48□□□□□ -1.05
CAPN3-203ENST00000349748 PAX8Q06710 450 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 TUSC5Q8IXB3 177 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 AMN1Q8IY45 258 aa8.48□□□□□ -1.05
CAPN3-203ENST00000349748 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 DCTN5Q9BTE1 182 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 UBTD1Q9HAC8 227 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 RAXQ9Y2V3 346 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 DCHS1Q96JQ0 3298 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 IGHV5-10-1A0A0J9YXX1 117 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 A8MWV9 139 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 COX7A2P2O60397 106 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 TBC1D28Q2M2D7 210 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 AAED1Q7RTV5 226 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 PIFOQ8TCI5 191 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 RITA1Q96K30 269 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 ZNF492Q9P255 531 aa8.47□□□□□ -1.05
CAPN3-203ENST00000349748 IGLV3-32A0A0A0MS00 114 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 TRGV8A0A0C4DH27 118 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 MYCNOSP40205 109 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 PCBD1P61457 104 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 RIGQ13278 110 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 PDPNQ86YL7 162 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 LINC01587Q99440 93 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 FOXC2Q99958 501 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 PIEZO1Q92508 2521 aa8.46□□□□□ -1.05
CAPN3-203ENST00000349748 ZNF292O60281 2723 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 TRAV40A0A0B4J280 105 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM213A2RRL7 107 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 TCL1BO95988 128 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 CELA2AP08217 269 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 CCL4P13236 92 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 CD59P13987 128 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 PATE2Q6UY27 113 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 SLC25A48Q6ZT89 311 aaKnown RBP8.46□□□□□ -1.06
CAPN3-203ENST00000349748 ZMAT4Q9H898 229 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 OCIAD1Q9NX40 245 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 AHCTF1Q8WYP5 2266 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM30CPA0ZSE6 113 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 C15orf61A6NNL5 157 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
CAPN3-203ENST00000349748 WDR86Q86TI4 376 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 MRPL32Q9BYC8 188 aaKnown RBP8.46□□□□□ -1.06
CAPN3-203ENST00000349748 C21orf62Q9NYP8 219 aa8.46□□□□□ -1.06
CAPN3-203ENST00000349748 IGLV3-12A0A075B6K2 115 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 C10orf113Q5VZT2 155 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 CALYQ9NYX4 217 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 ZNF503-AS2A6NEH8 195 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 J3QT63 122 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 DKK1O94907 266 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 NPYP01303 97 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 HSPE1P61604 102 aaKnown RBP8.45□□□□□ -1.06
CAPN3-203ENST00000349748 TAL2Q16559 108 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 NPIPB3Q92617 1050 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 PROCRQ9UNN8 238 aa8.45□□□□□ -1.06
CAPN3-203ENST00000349748 OOEPA6NGQ2 149 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 TMEM78Q5T7P6 136 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 ORMDL3Q8N138 153 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 DEFB124Q8NES8 71 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 OR13A1Q8NGR1 328 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 DNAJC30Q96LL9 226 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 NGBQ9NPG2 151 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 MDFICQ9P1T7 246 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 HLA-DRB4P13762 266 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 TNFRSF1AP19438 455 aa8.44□□□□□ -1.06
CAPN3-203ENST00000349748 C3orf36Q3SXR2 165 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms