RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 TMEM75Q8N9X5 138 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 PPIFP30405 207 aaKnown RBP11.84□□□□□ -0.51
NUP50-201ENST00000347635 IFI27P40305 119 aaPredicted RBP11.84□□□□□ -0.51
NUP50-201ENST00000347635 STPG4Q8N801 248 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 TEX36Q5VZQ5 186 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 THAP8Q8NA92 274 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 KIR2DL4Q99706 377 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 DOCK11Q5JSL3 2073 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 MUC6Q6W4X9 2439 aa11.84□□□□□ -0.51
NUP50-201ENST00000347635 PPP1R17O96001 155 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 SSBP2P81877 361 aaPredicted RBP11.83□□□□□ -0.52
NUP50-201ENST00000347635 SRSF1Q07955 248 aaKnown RBP eCLIP11.83□□□□□ -0.52
NUP50-201ENST00000347635 VMO1Q7Z5L0 202 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 TDRG1Q3Y452 100 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 COL8A2P25067 703 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 KLF5Q13887 457 aaPredicted RBP11.83□□□□□ -0.52
NUP50-201ENST00000347635 MAJINQ3KP22 176 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 SAMD5Q5TGI4 173 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 LINC01356Q8N9X3 169 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 SMPXQ9UHP9 88 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 PCNX3Q9H6A9 2034 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 HAX1O00165 279 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 P0C879 139 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 LINC01559Q495D7 138 aa11.83□□□□□ -0.52
NUP50-201ENST00000347635 AMN1Q8IY45 258 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 H7C2G1 150 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
NUP50-201ENST00000347635 NAA38Q9BRA0 125 aaKnown RBP11.82□□□□□ -0.52
NUP50-201ENST00000347635 TRAV40A0A0B4J280 105 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 SNRPD3P62318 126 aaKnown RBP11.82□□□□□ -0.52
NUP50-201ENST00000347635 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 SRSF8Q9BRL6 282 aaKnown RBP11.82□□□□□ -0.52
NUP50-201ENST00000347635 PRTN3P24158 256 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 CNTFRP26992 372 aa11.82□□□□□ -0.52
NUP50-201ENST00000347635 RHOGP84095 191 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 DDB2Q92466 427 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 FER1L5A0AVI2 2057 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 ZNF407Q9C0G0 2248 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 PF4P02776 101 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 Q8TAT8 98 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 PTPRSQ13332 1948 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 A0A1B0GWB2 263 aa11.81□□□□□ -0.52
NUP50-201ENST00000347635 ESPL1Q14674 2120 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 GAGE12BA1L429 117 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 FAM74A4Q5TZK3 123 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 ARL6IP6Q8N6S5 226 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 IGF2BP2-AS1Q96M15 143 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 TRBV19A0A075B6N1 114 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 PLA2G5P39877 138 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 PDE6HQ13956 83 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 KIR3DS1Q14943 382 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 RAX2Q96IS3 184 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 LTAP01374 205 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 GTSCR1Q86UQ5 136 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 TMEM14CQ9P0S9 112 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 ADAMTS9Q9P2N4 1935 aa11.8□□□□□ -0.52
NUP50-201ENST00000347635 LAGE3Q14657 143 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 ZNF56Q15929 161 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 PEMTQ9UBM1 199 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 SMKR1H3BMG3 65 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 NPFFO15130 113 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 DIAPH2-AS1Q14236 149 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 C5orf64Q2M2E5 130 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 SPRNQ5BIV9 151 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 RNASE4P34096 147 aaKnown RBP11.79□□□□□ -0.52
NUP50-201ENST00000347635 KLRD1Q13241 179 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 BCL6BQ8N143 479 aaPredicted RBP11.79□□□□□ -0.52
NUP50-201ENST00000347635 BPESC1Q9GZL8 116 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 LHBP01229 141 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 ESDP10768 282 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 COL6A6A6NMZ7 2263 aa11.79□□□□□ -0.52
NUP50-201ENST00000347635 PCDH15Q96QU1 1955 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 ORMDL2Q53FV1 153 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 C8orf49Q96NF6 230 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 ZFHX2Q9C0A1 2572 aaPredicted RBP11.78□□□□□ -0.52
NUP50-201ENST00000347635 NCOA6Q14686 2063 aaPredicted RBP11.78□□□□□ -0.52
NUP50-201ENST00000347635 TMEM213A2RRL7 107 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 K7EM74 188 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 CHTOPQ9Y3Y2 248 aaKnown RBP11.78□□□□□ -0.52
NUP50-201ENST00000347635 LOXP28300 417 aaPredicted RBP11.78□□□□□ -0.52
NUP50-201ENST00000347635 KMT2EQ8IZD2 1858 aa11.78□□□□□ -0.52
NUP50-201ENST00000347635 PAX1P15863 534 aa11.77□□□□□ -0.52
NUP50-201ENST00000347635 ZNF479Q96JC4 524 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 CST9LQ9H4G1 147 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 DIDO1Q9BTC0 2240 aaKnown RBP11.77□□□□□ -0.53
NUP50-201ENST00000347635 C15orf32Q32M92 178 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 DUX5Q96PT3 197 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 PRSS46E5RG02 174 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 FAM104BQ5XKR9 115 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 IGFL4Q6B9Z1 124 aa11.77□□□□□ -0.53
NUP50-201ENST00000347635 A0A1B0GV72 72 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 SMAGPQ0VAQ4 97 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 OCIAD2Q56VL3 154 aa11.76□□□□□ -0.53
NUP50-201ENST00000347635 IGLC7A0M8Q6 106 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms