RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 IGHV3OR16-10A0A075B7F0 116 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 DNAL4O96015 105 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 EVI2AP22794 236 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 NPPCP23582 126 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 IFI27P40305 119 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-201ENST00000346162 NUP210Q8TEM1 1887 aaPredicted RBP12.62□□□□□ -0.39
SRPK1-201ENST00000346162 PIMREGQ9BSJ6 248 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 GOLGB1Q14789 3259 aaKnown RBP12.62□□□□□ -0.39
SRPK1-201ENST00000346162 C15orf62A8K5M9 175 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 NDUFB8O95169 186 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 LINC00205P59089 165 aa12.62□□□□□ -0.39
SRPK1-201ENST00000346162 TCRBV4S1A1TA0A5B7 111 aa12.61□□□□□ -0.39
SRPK1-201ENST00000346162 FOXI3A8MTJ6 420 aaPredicted RBP12.61□□□□□ -0.39
SRPK1-201ENST00000346162 ATP5G2Q06055 141 aa12.61□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
SRPK1-201ENST00000346162 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
SRPK1-201ENST00000346162 IGKV1D-17A0A075B6S4 117 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 C10orf55Q5SWW7 151 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 C1QTNF4Q9BXJ3 329 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 TRAV3A0A0B4J244 114 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 TRAV12-3A0A0B4J271 114 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 Q6ZS92 163 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 EEF1AKMT3Q96AZ1 226 aa12.6□□□□□ -0.39
SRPK1-201ENST00000346162 ZNF474Q6S9Z5 364 aaPredicted RBP12.6□□□□□ -0.39
SRPK1-201ENST00000346162 C22orf46C9J442 243 aa12.59□□□□□ -0.39
SRPK1-201ENST00000346162 RNF166Q96A37 237 aaPredicted RBP12.59□□□□□ -0.39
SRPK1-201ENST00000346162 NPIPB6E9PJ23 425 aa12.59□□□□□ -0.39
SRPK1-201ENST00000346162 NBR2O15453 112 aa12.59□□□□□ -0.39
SRPK1-201ENST00000346162 PSG8Q9UQ74 426 aa12.59□□□□□ -0.39
SRPK1-201ENST00000346162 HERV-K104P63124 156 aa12.59□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV3OR16-8A0A075B7F1 116 aa12.58□□□□□ -0.39
SRPK1-201ENST00000346162 IGHV3-49A0A0A0MS15 119 aa12.58□□□□□ -0.39
SRPK1-201ENST00000346162 ZNF56Q15929 161 aa12.58□□□□□ -0.39
SRPK1-201ENST00000346162 SRSF1Q07955 248 aaKnown RBP eCLIP12.58□□□□□ -0.41e-9■■□□□ 11.8
SRPK1-201ENST00000346162 C2orf82Q6UX34 121 aa12.58□□□□□ -0.4
SRPK1-201ENST00000346162 NUP37Q8NFH4 326 aa12.58□□□□□ -0.4
SRPK1-201ENST00000346162 IGLV3-1P01715 115 aa12.58□□□□□ -0.4
SRPK1-201ENST00000346162 WFDC2Q14508 124 aa12.58□□□□□ -0.4
SRPK1-201ENST00000346162 DYNLRB2Q8TF09 96 aa12.58□□□□□ -0.4
SRPK1-201ENST00000346162 M0R381 172 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 ZNF503-AS2A6NEH8 195 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 COX6B1P14854 86 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 FAM106AQ4KMX7 169 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 TMEM200BQ69YZ2 307 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 C16orf54Q6UWD8 224 aa12.57□□□□□ -0.4
SRPK1-201ENST00000346162 PRB4P10163 310 aaPredicted RBP12.57□□□□□ -0.4
SRPK1-201ENST00000346162 TMEM8BA6NDV4 472 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 LINC01549A6NIU2 74 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 TRGV3P03979 118 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 TMEM101Q96IK0 257 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 YPEL4Q96NS1 127 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 SMIM27A0A1W2PRY6 76 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 FABP5P3A8MUU1 101 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 TIMM23O14925 209 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 YAE1D1Q9NRH1 226 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 A0A0G2JNJ9 132 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 RAX2Q96IS3 184 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 Q9UFV3 132 aa12.56□□□□□ -0.4
SRPK1-201ENST00000346162 ZGRF1Q86YA3 2104 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 ARHGAP21Q5T5U3 1957 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 ORMDL2Q53FV1 153 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 C8orf86Q6ZUL3 223 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 LHFPL4Q7Z7J7 247 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 K7EN84 100 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 ZNF688P0C7X2 276 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 AMN1Q8IY45 258 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 TCRAP04437 139 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
SRPK1-201ENST00000346162 LYZL1Q6UWQ5 148 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 ZNF562Q6V9R5 426 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 GAFA1Q96PS6 74 aa12.55□□□□□ -0.4
SRPK1-201ENST00000346162 TRAV40A0A0B4J280 105 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 IGHV3-66A0A0C4DH42 116 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 LGALS9BQ3B8N2 356 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 LGALS9CQ6DKI2 356 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 GFRA4Q9GZZ7 299 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 MALRD1Q5VYJ5 2156 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 FNDC10F2Z333 226 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 H0YJW9 148 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 SIVA1O15304 175 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 IGHV1-8P0DP01 117 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 MYOD1P15172 320 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 RNF138Q8WVD3 245 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 CCL19Q99731 98 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 PLNP26678 52 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 RNF125Q96EQ8 232 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 RHOGP84095 191 aa12.54□□□□□ -0.4
SRPK1-201ENST00000346162 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
SRPK1-201ENST00000346162 SMKR1H3BMG3 65 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 FCN3O75636 299 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 RNASE1P07998 156 aaKnown RBP12.53□□□□□ -0.4
SRPK1-201ENST00000346162 TMEM158Q8WZ71 300 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 ASCL2Q99929 193 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 PRSS29PA6NIE9 313 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 ATRXP46100 2492 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 PVRIGQ6DKI7 326 aa12.53□□□□□ -0.4
SRPK1-201ENST00000346162 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms