RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TNFRSF18Q9Y5U5 241 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 CEACAM4O75871 244 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 TNFRSF6BO95407 300 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 IGHV4-39P01824 125 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 NAA38Q9BRA0 125 aaKnown RBP3.87□□□□□ -1.79
CSMD3-203ENST00000343508 KLF12Q9Y4X4 402 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 MYMXA0A1B0GTQ4 84 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 SRSF6Q13247 344 aaKnown RBP3.87□□□□□ -1.79
CSMD3-203ENST00000343508 ZC2HC1BQ5TFG8 222 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 OR11H6Q8NGC7 330 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 MCRIP2Q9BUT9 160 aaKnown RBP3.87□□□□□ -1.79
CSMD3-203ENST00000343508 NDUFB8O95169 186 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 IGHV3-23P01764 117 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 CD24P25063 80 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 SFTA2Q6UW10 78 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 NUP37Q8NFH4 326 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 RNASE8Q8TDE3 154 aaKnown RBP3.87□□□□□ -1.79
CSMD3-203ENST00000343508 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 SLC25A15Q9Y619 301 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 H3BMG7 143 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 CLEC19AQ6UXS0 136 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 NEU4Q8WWR8 484 aaPredicted RBP3.87□□□□□ -1.79
CSMD3-203ENST00000343508 PGPEP1Q9NXJ5 209 aa3.87□□□□□ -1.79
CSMD3-203ENST00000343508 NCR2O95944 276 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF747Q9BV97 191 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 FXYD7P58549 80 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 FOXI2Q6ZQN5 318 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 IGF2BP2-AS1Q96M15 143 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 C9orf172C9J069 976 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 PCDH15Q96QU1 1955 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TRBV7-1A0A0A6YYK4 115 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 A0A1W2PPI3 338 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 MLANAQ16655 118 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 DPH3P1Q9H4G8 78 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF503-AS2A6NEH8 195 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 G3V4G9 280 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TMEM178BH3BS89 294 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 SSBP2P81877 361 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-203ENST00000343508 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 KNTC1P50748 2209 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 DKK1O94907 266 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TGFAP01135 160 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 C17orf58Q2M2W7 97 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TSSC4Q9Y5U2 329 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-203ENST00000343508 PTPRSQ13332 1948 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TRBV19A0A075B6N1 114 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 M0R2P5 195 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 IGLC1P0CG04 106 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 GAFA1Q96PS6 74 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 GATA4P43694 442 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 SHANK2-AS3Q9BTD1 123 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 FAM57AQ8TBR7 257 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 OVOL1O14753 267 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 CRXO43186 299 aaPredicted RBP3.86□□□□□ -1.79
CSMD3-203ENST00000343508 RNASE4P34096 147 aaKnown RBP3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TMEM155Q4W5P6 130 aa3.86□□□□□ -1.79
CSMD3-203ENST00000343508 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MYOD1P15172 320 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 PPIFP30405 207 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 Q8N8P6 123 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 UBTD1Q9HAC8 227 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 IGHV3-66A0A0C4DH42 116 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF134P52741 427 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 RBMY1BA6NDE4 496 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 RBMY1EA6NEQ0 496 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 RBMY1DP0C7P1 496 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 RBMY1A1P0DJD3 496 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 RBMY1CP0DJD4 496 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 IFITM1P13164 125 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 SIGLEC8Q9NYZ4 499 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 CABIN1Q9Y6J0 2220 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 SHISA9B4DS77 424 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 K7EM74 188 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 TIMM23O14925 209 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 CD7P09564 240 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 PF4V1P10720 104 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MRPL51Q4U2R6 128 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 LINC01545Q5VT33 79 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MDS2Q8NDY4 140 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 JMJD8Q96S16 334 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MBD3L4A6NDZ8 208 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MBD3L3A6NE82 208 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MBD3L5A6NJ08 208 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 SUMO2P61956 95 aaKnown RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 MBD3L2Q8NHZ7 208 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 S4R3C0 116 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 USP34Q70CQ2 3546 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF688P0C7X2 276 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 C19orf54Q5BKX5 351 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 TMEM101Q96IK0 257 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 C10orf55Q5SWW7 151 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 ZNF48Q96MX3 618 aaPredicted RBP3.85□□□□□ -1.79
CSMD3-203ENST00000343508 PRR25Q96S07 402 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 VCYO14598 125 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 DDB2Q92466 427 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 FAM168AQ92567 244 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 LHFPL4Q7Z7J7 247 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 ATP1A1-AS1Q5TC04 95 aa3.85□□□□□ -1.79
CSMD3-203ENST00000343508 DNAJC13O75165 2243 aa3.84□□□□□ -1.79
CSMD3-203ENST00000343508 H3BMM0 161 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms