RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 SETXQ7Z333 2677 aaKnown RBP13.12□□□□□ -0.31
FRMD4A-202ENST00000342409 A0A087X0K7 114 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 GNG4P50150 75 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 TAS2R60P59551 318 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 C1orf194Q5T5A4 169 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 C15orf54Q8N8G6 183 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 WIPF2Q8TF74 440 aaPredicted RBP13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 ATG101Q9BSB4 218 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 RPH3ALQ9UNE2 315 aa13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 SETD2Q9BYW2 2564 aaPredicted RBP13.11□□□□□ -0.31
FRMD4A-202ENST00000342409 LGALS1P09382 135 aaKnown RBP13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 PRB4P10163 310 aaPredicted RBP13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 CNN1P51911 297 aaKnown RBP13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 TMEM183BQ1AE95 376 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 C16orf54Q6UWD8 224 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 C18orf65Q6ZTR6 163 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 FAM24BQ8N5W8 94 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 KLHDC1Q8N7A1 406 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 GLMPQ8WWB7 406 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 UBE2E2Q96LR5 201 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 FN1P02751 2386 aaKnown RBP13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 M0R3E3 92 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 MT-ND4LP03901 98 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 EDN2P20800 178 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 S100A7P31151 101 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 OR5I1Q13606 314 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 Q71RC1 249 aaPredicted RBP13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 SGK494Q96LW2 274 aa13.1□□□□□ -0.31
FRMD4A-202ENST00000342409 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 IGLV2-11P01706 119 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 ATF4P18848 351 aaPredicted RBP13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 HLA-DMBP28068 263 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 HILS1P60008 231 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 ELOBQ15370 118 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 TM4SF20Q53R12 229 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 GPHB5Q86YW7 130 aa13.09□□□□□ -0.31
FRMD4A-202ENST00000342409 ZNF253O75346 499 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 IGFL4Q6B9Z1 124 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 NHLRC2Q8NBF2 726 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 SFRP2Q96HF1 295 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 GPR82Q96P67 336 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 IGHV4OR15-8A0A075B7B6 117 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 A0A087WW49 117 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 ZNF320A2RRD8 509 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 GCGP01275 180 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 CXCL1P09341 107 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 CD99P14209 185 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 HIST2H2BDQ6DRA6 164 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 GOLT1AQ6ZVE7 132 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 URGCP-MRPS24S4R325 110 aa13.08□□□□□ -0.32
FRMD4A-202ENST00000342409 DIRC3C9JPN6 131 aa13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 H7BYZ3 331 aa13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 PFN1P07737 140 aaKnown RBP13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 GALR1P47211 349 aa13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 PSG9Q00887 426 aa13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 ZNF418Q8TF45 676 aaPredicted RBP13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 ANAPC16Q96DE5 110 aa13.07□□□□□ -0.32
FRMD4A-202ENST00000342409 TRAV8-2A0A0B4J237 113 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 IGHV7-4-1A0A0J9YVY3 117 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 ZNF785A8K8V0 405 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 INAFM1C9JVW0 142 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 BAGE2Q86Y30 109 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 CMTM2Q8TAZ6 248 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 FMC1Q96HJ9 113 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 MLST8Q9BVC4 326 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 PRELID1Q9Y255 219 aa13.06□□□□□ -0.32
FRMD4A-202ENST00000342409 TGIF2-C20orf24A0A0A6YYL0 155 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 K7EMT4 169 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 LTAP01374 205 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 Q86TA4 180 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 FOSL1P15407 271 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 CDX1P47902 265 aaPredicted RBP13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 UBE2G1P62253 170 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 FAM106AQ4KMX7 169 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 OR10G8Q8NGN5 311 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 AAMDCQ9H7C9 122 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 DAZ1Q9NQZ3 744 aaKnown RBP13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 SMPXQ9UHP9 88 aa13.05□□□□□ -0.32
FRMD4A-202ENST00000342409 TRBV6-1A0A0K0K1D8 114 aa13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 TMEM213A2RRL7 107 aa13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 ZNF705FA8MVS1 300 aaPredicted RBP13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 CHEK1O14757 476 aa13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 S100A9P06702 114 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 RPEL1Q2QD12 228 aa13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 RNASE7Q9H1E1 156 aaKnown RBP13.04□□□□□ -0.32
FRMD4A-202ENST00000342409 CRYBA1P05813 215 aa13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 MGST1P10620 155 aaKnown RBP13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 RAB5AP20339 215 aa13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 DEFB136Q30KP8 78 aa13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 C8orf86Q6ZUL3 223 aa13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 REC114Q7Z4M0 266 aa13.03□□□□□ -0.32
FRMD4A-202ENST00000342409 RNF182Q8N6D2 247 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms