RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 TEN1Q86WV5 123 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 AMN1Q8IY45 258 aa14.72□□□□□ -0.05
SMPD1-201ENST00000342245 PINLYPA6NC86 204 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 PRSS29PA6NIE9 313 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 ZNF785A8K8V0 405 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 CLEC3BP05452 202 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 MEOX1P50221 254 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 GTSCR1Q86UQ5 136 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 TRAV8-1A0A0A6YYK1 113 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 SRD5A1P18405 259 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 CCL11P51671 97 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 C17orf58Q2M2W7 97 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 CITED1Q99966 193 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 FAM173AQ9BQD7 235 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 TTTY13Q9BZ97 58 aa14.71□□□□□ -0.05
SMPD1-201ENST00000342245 NXT2Q9NPJ8 142 aaKnown RBP14.71□□□□□ -0.05
SMPD1-201ENST00000342245 TRBV7-3A0A075B6L6 115 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 IGKV1D-17A0A075B6S4 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE12JA6NER3 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE7O76087 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 ZNF688P0C7X2 276 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE12FP0CL80 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE12GP0CL81 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE12IP0CL82 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 GAGE4Q13068 117 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 TPPP3Q9BW30 176 aa14.7□□□□□ -0.06
SMPD1-201ENST00000342245 NHLRC4P0CG21 123 aaPredicted RBP14.7□□□□□ -0.06
SMPD1-201ENST00000342245 PPIFP30405 207 aaKnown RBP14.7□□□□□ -0.06
SMPD1-201ENST00000342245 DYSFO75923 2080 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 LY6G6EA0A0G2JKS1 128 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 NCBP2LA6PVI3 153 aaKnown RBP14.69□□□□□ -0.06
SMPD1-201ENST00000342245 SRRM5B3KS81 715 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 TIMM8AO60220 97 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-201ENST00000342245 IGKV1-16P04430 117 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 FXYD7P58549 80 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 HARBI1Q96MB7 349 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 U3KQA8 63 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 TANC2Q9HCD6 1990 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 HOXA4Q00056 320 aaPredicted RBP14.69□□□□□ -0.06
SMPD1-201ENST00000342245 LYZL1Q6UWQ5 148 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 SMIM20Q8N5G0 67 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 GLMPQ8WWB7 406 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 LEAP2Q969E1 77 aa14.69□□□□□ -0.06
SMPD1-201ENST00000342245 TMEM8BA6NDV4 472 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 K7ESF4 209 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 NPYP01303 97 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 LEPP41159 167 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 WDFY3Q8IZQ1 3526 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 RHODO00212 210 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 RBP4P02753 201 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 ARL3P36405 182 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 HES3Q5TGS1 186 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 LYPD1Q8N2G4 141 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 C12orf49Q9H741 205 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 HIGD1AQ9Y241 93 aa14.68□□□□□ -0.06
SMPD1-201ENST00000342245 CNIH1O95406 144 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 IGHG4P01861 327 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 MORN3Q6PF18 240 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-201ENST00000342245 TMEM167AQ8TBQ9 72 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 FOXC2Q99958 501 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 SDK2Q58EX2 2172 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 RPEQ96AT9 228 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 CARD19Q96LW7 228 aa14.67□□□□□ -0.06
SMPD1-201ENST00000342245 ZNF71Q9NQZ8 489 aaPredicted RBP14.67□□□□□ -0.06
SMPD1-201ENST00000342245 WT1-ASQ06250 92 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 TMEM213A2RRL7 107 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 PLNP26678 52 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 ASIPP42127 132 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 CXCL12P48061 93 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 WFDC3Q8IUB2 231 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 FAM169BQ8N8A8 192 aa14.66□□□□□ -0.06
SMPD1-201ENST00000342245 WDR87Q6ZQQ6 2873 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 PCSK5Q92824 1860 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 K7EMI3 77 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 BRI3O95415 125 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 MAPKAPK5-AS1Q8N8E1 139 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 TRBV20-1A0A075B6N2 111 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 FABP5P3A8MUU1 101 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 SBSPONQ8IVN8 264 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 HIF1ANQ9NWT6 349 aa14.65□□□□□ -0.06
SMPD1-201ENST00000342245 FAM90A27PA6NNH2 459 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 NDUFV3P56181 108 aaKnown RBP14.64□□□□□ -0.07
SMPD1-201ENST00000342245 LINC00574Q9H8X3 128 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 MRPL36Q9P0J6 103 aaKnown RBP14.64□□□□□ -0.07
SMPD1-201ENST00000342245 CENPVL3A0A0U1RRI6 287 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 H3BTX0 84 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 CRIP1P50238 77 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 PVRIGQ6DKI7 326 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 Q6Q795 121 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 TMEM160Q9NX00 188 aa14.64□□□□□ -0.07
SMPD1-201ENST00000342245 A8MWV9 139 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 PSMB2P49721 201 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 GAGE2BQ13066 116 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 GAGE2EQ4V326 116 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 ZNF833PQ6ZTB9 187 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 EXOC3-AS1Q8N2X6 119 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 GAGE2DQ9UEU5 116 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 TNFRSF1AP19438 455 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 Q0VFX4 171 aa14.63□□□□□ -0.07
SMPD1-201ENST00000342245 UTF1Q5T230 341 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms