RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 RNASE8Q8TDE3 154 aaKnown RBP8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 GPR82Q96P67 336 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGKV1D-17A0A075B6S4 117 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 GGTLC3B5MD39 225 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 LY6EQ16553 131 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 GRAMD2BQ96HH9 432 aa8.45□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGHV3-64A0A075B6Q5 118 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGKV2-40A0A087WW87 121 aaPredicted RBP8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 A0A1B0GW64 132 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGKV2D-40P01614 121 aaPredicted RBP8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 LIPFP07098 398 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 RPL15P61313 204 aaKnown RBP8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 EPDR1Q9UM22 224 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 ERVK11-1P61568 191 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 UTF1Q5T230 341 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 GTSCR1Q86UQ5 136 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 TMEM186Q96B77 213 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 SRRM5B3KS81 715 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 OR1N2Q8NGR9 330 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 LYPD6BQ8NI32 183 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 RAB1BQ9H0U4 201 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 UPK2O00526 184 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 WNT2P09544 360 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 CNTFRP26992 372 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 CD69Q07108 199 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 Q8NFD4 153 aa8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 PEF1Q9UBV8 284 aaKnown RBP8.44□□□□□ -1.06
CAPRIN1-201ENST00000341394 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 A0A1B0GWB2 263 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 A0A1B0GWJ7 208 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 SELENOTP62341 195 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 FBXL19-AS1Q494R0 122 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 MORN5Q5VZ52 161 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 C18orf32Q8TCD1 76 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 GNB1LQ9BYB4 327 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 PPIAL4CA0A0B4J2A2 164 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 A0A0U1RRA0 63 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGHV3-11P01762 117 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 PPIAL4GP0DN37 164 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 FAM71F2Q6NXP2 309 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 TPSG1Q9NRR2 321 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 FLNBO75369 2602 aaKnown RBP8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 ABCA12Q86UK0 2595 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 GAGE12BA1L429 117 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 C9JCJ5 164 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 D6R8Y8 96 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 TCRAP04437 139 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGLC2P0DOY2 106 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGLC3P0DOY3 106 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 CFHR2P36980 270 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 CX3CL1P78423 397 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 AMN1Q8IY45 258 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 DPF1Q92782 380 aa8.43□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGHV1-69-2A0A0G2JMI3 117 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 ITLN2Q8WWU7 325 aaPredicted RBP8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 CCL25O15444 150 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 ARMS2P0C7Q2 107 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 UBE2V1Q13404 147 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 RBPMS2Q6ZRY4 209 aaKnown RBP8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 OSTCQ9NRP0 149 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 HCFC1P51610 2035 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 MTORP42345 2549 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGKV3D-20A0A0C4DH25 116 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 C1orf122Q6ZSJ8 110 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 TTTY13Q9BZ97 58 aa8.42□□□□□ -1.06
CAPRIN1-201ENST00000341394 TMEM213A2RRL7 107 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 IFI27P40305 119 aaPredicted RBP8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 LGALS7P47929 136 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 ZNF672Q499Z4 452 aaPredicted RBP8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 LYPD2Q6UXB3 125 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 SRRM4A7MD48 611 aaKnown RBP8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 LEPP41159 167 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 C16orf92Q96LL3 132 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 TRBV9A0A0B4J1U6 114 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 ODF3L1Q8IXM7 274 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 TMEM75Q8N9X5 138 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 OR2K2Q8NGT1 345 aa8.41□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGHV3OR16-12A0A075B7B8 117 aa8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 KLRD1Q13241 179 aa8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 SRSF8Q9BRL6 282 aaKnown RBP8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 CHD6Q8TD26 2715 aa8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 NAV2Q8IVL1 2488 aa8.4□□□□□ -1.06
CAPRIN1-201ENST00000341394 YPEL1O60688 119 aa8.4□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM170BQ5T4T1 132 aa8.4□□□□□ -1.07
CAPRIN1-201ENST00000341394 YPEL2Q96QA6 119 aa8.4□□□□□ -1.07
CAPRIN1-201ENST00000341394 MAP1LC3AQ9H492 121 aa8.4□□□□□ -1.07
CAPRIN1-201ENST00000341394 FBN2P35556 2912 aa8.4□□□□□ -1.07
CAPRIN1-201ENST00000341394 SYS1-DBNDD2H3BUS1 97 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 COX11Q9Y6N1 276 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 V9GYV3 84 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 GATA4P43694 442 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 NDPQ00604 133 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 PRCDQ00LT1 54 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 TMEM78Q5T7P6 136 aa8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 MRPL16Q9NX20 251 aaKnown RBP8.39□□□□□ -1.07
CAPRIN1-201ENST00000341394 FAM231BA6NCW3 169 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms