RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 C1orf194Q5T5A4 169 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 GPHB5Q86YW7 130 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 KLHL30-AS1Q8NEE0 82 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 CMTM2Q8TAZ6 248 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 TMEM158Q8WZ71 300 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 DPF1Q92782 380 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 DAZ1Q9NQZ3 744 aaKnown RBP13.29□□□□□ -0.28
CLDN4-201ENST00000340958 RPH3ALQ9UNE2 315 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 TRBV19A0A075B6N1 114 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 IGHV4OR15-8A0A075B7B6 117 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 A0A087WW49 117 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 A0A1W2PS18 150 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 IGLC2P0DOY2 106 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 RPL35P42766 123 aaKnown RBP13.29□□□□□ -0.28
CLDN4-201ENST00000340958 C4orf3Q8WVX3 66 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 UFC1Q9Y3C8 167 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 RNF114Q9Y508 228 aa13.29□□□□□ -0.28
CLDN4-201ENST00000340958 AKR1D1P51857 326 aa13.28□□□□□ -0.28
CLDN4-201ENST00000340958 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
CLDN4-201ENST00000340958 C18orf65Q6ZTR6 163 aa13.28□□□□□ -0.28
CLDN4-201ENST00000340958 TVP23CQ96ET8 276 aa13.28□□□□□ -0.28
CLDN4-201ENST00000340958 C17orf77Q96MU5 243 aa13.28□□□□□ -0.28
CLDN4-201ENST00000340958 A0A1W2PRX2 142 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 S100A12P80511 92 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 TMEM241Q24JQ0 296 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 DEFB136Q30KP8 78 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 TM4SF20Q53R12 229 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 AAMDCQ9H7C9 122 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 TUBA4BQ9H853 241 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 DNHD1Q96M86 4753 aa13.27□□□□□ -0.28
CLDN4-201ENST00000340958 MRPS12O15235 138 aaKnown RBP13.27□□□□□ -0.29
CLDN4-201ENST00000340958 CD28P10747 220 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 HOXD3P31249 432 aaPredicted RBP13.27□□□□□ -0.29
CLDN4-201ENST00000340958 SYNJ2BPP57105 145 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 RPL11P62913 178 aaKnown RBP13.27□□□□□ -0.29
CLDN4-201ENST00000340958 PSG9Q00887 426 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 RNF212Q495C1 297 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 SIGLEC15Q6ZMC9 328 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 EXOC3-AS1Q8N2X6 119 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 OR11H1Q8NG94 326 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 DERL1Q9BUN8 251 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 OTORQ9NRC9 128 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 NAT8Q9UHE5 227 aa13.27□□□□□ -0.29
CLDN4-201ENST00000340958 LINC01619G3V211 115 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 BMI1P35226 326 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 AKR1C3P42330 323 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 PDE6HQ13956 83 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 HIST2H2BDQ6DRA6 164 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.26□□□□□ -0.29
CLDN4-201ENST00000340958 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 C2CD4CQ8TF44 421 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 HIST1H2BAQ96A08 127 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 C12orf57Q99622 126 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 TCEAL7Q9BRU2 100 aa13.26□□□□□ -0.29
CLDN4-201ENST00000340958 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 HELTA6NFD8 242 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 PCP4L1A6NKN8 68 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 GNG5P63218 68 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 AWAT1Q58HT5 328 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 ZFP82Q8N141 532 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 LYPD1Q8N2G4 141 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 C11orf52Q96A22 123 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 RPS10P5Q9NQ39 176 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 EPDR1Q9UM22 224 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 U3KQE9 123 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 STAB1Q9NY15 2570 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 C7orf77A4D0Y5 90 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 K7EMT4 169 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 SLC17A3O00476 420 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 PEX7O00628 323 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 CNN1P51911 297 aaKnown RBP13.25□□□□□ -0.29
CLDN4-201ENST00000340958 RAB5BP61020 215 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 ADIRFQ15847 76 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 C16orf54Q6UWD8 224 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 C1QL4Q86Z23 238 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 C5orf17Q8NAS9 161 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 RHPN1-AS1Q9BWJ2 59 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 TSSC4Q9Y5U2 329 aaPredicted RBP13.25□□□□□ -0.29
CLDN4-201ENST00000340958 SMAD5-AS1Q9Y6J3 95 aa13.25□□□□□ -0.29
CLDN4-201ENST00000340958 MT-ND4LP03901 98 aa13.24□□□□□ -0.29
CLDN4-201ENST00000340958 MYCNOSP40205 109 aa13.24□□□□□ -0.29
CLDN4-201ENST00000340958 CSN1S1P47710 185 aa13.24□□□□□ -0.29
CLDN4-201ENST00000340958 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
CLDN4-201ENST00000340958 C8orf86Q6ZUL3 223 aa13.24□□□□□ -0.29
CLDN4-201ENST00000340958 DUX3Q96PT4 197 aa13.24□□□□□ -0.29
CLDN4-201ENST00000340958 CITED2Q99967 270 aaPredicted RBP13.24□□□□□ -0.29
CLDN4-201ENST00000340958 MEOX2P50222 304 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 SLURP1P55000 103 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 UBE2G1P62253 170 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 WIPF2Q8TF74 440 aaPredicted RBP13.23□□□□□ -0.29
CLDN4-201ENST00000340958 WFDC12Q8WWY7 111 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 SDF2L1Q9HCN8 221 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 TENM1Q9UKZ4 2725 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 C1orf196B1AJZ1 125 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 GNG4P50150 75 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 REC114Q7Z4M0 266 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 SMPXQ9UHP9 88 aa13.23□□□□□ -0.29
CLDN4-201ENST00000340958 C5orf52A6NGY3 159 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms