RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 J3QQQ9 107 aa13.54□□□□□ -0.24
CDK11B-201ENST00000340677 PPYP01298 95 aa13.54□□□□□ -0.24
CDK11B-201ENST00000340677 FAM27BQ5VT28 67 aa13.54□□□□□ -0.24
CDK11B-201ENST00000340677 WIPF2Q8TF74 440 aaPredicted RBP13.54□□□□□ -0.24
CDK11B-201ENST00000340677 LSM4Q9Y4Z0 139 aaKnown RBP13.54□□□□□ -0.24
CDK11B-201ENST00000340677 ZNF407Q9C0G0 2248 aa13.54□□□□□ -0.24
CDK11B-201ENST00000340677 NPIPB6E9PJ23 425 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 GOLT1AQ6ZVE7 132 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 C9orf85Q96MD7 179 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 PRDM14Q9GZV8 571 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 TPSG1Q9NRR2 321 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 A8MZ25 164 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 PFN2P35080 140 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 FXYD4P59646 89 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 TIMM9Q9Y5J7 89 aa13.53□□□□□ -0.24
CDK11B-201ENST00000340677 IZUMO1RA6ND01 250 aa13.52□□□□□ -0.24
CDK11B-201ENST00000340677 Q6ZSR3 168 aa13.52□□□□□ -0.24
CDK11B-201ENST00000340677 GJC3Q8NFK1 279 aa13.52□□□□□ -0.24
CDK11B-201ENST00000340677 FAM19A4Q96LR4 140 aa13.52□□□□□ -0.24
CDK11B-201ENST00000340677 UBE2L5PA0A1B0GUS4 154 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 SMIM27A0A1W2PRY6 76 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 CGB1A6NKQ9 187 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 PDCD6O75340 191 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 MPDU1O75352 247 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 DEFA4P12838 97 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 FAM57AQ8TBR7 257 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 DEFB127Q9H1M4 99 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 SPRR3Q9UBC9 169 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
CDK11B-201ENST00000340677 CDAP32320 146 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 CDSNQ15517 529 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 C1orf147Q96MC9 270 aaPredicted RBP13.51□□□□□ -0.25
CDK11B-201ENST00000340677 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 SRYQ05066 204 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 LY96Q9Y6Y9 160 aa13.51□□□□□ -0.25
CDK11B-201ENST00000340677 DMXL1Q9Y485 3027 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 MRPL33O75394 65 aaKnown RBP13.5□□□□□ -0.25
CDK11B-201ENST00000340677 DSCR8Q96T75 97 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 PRRG4Q9BZD6 226 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 TIMM8BQ9Y5J9 83 aaPredicted RBP13.5□□□□□ -0.25
CDK11B-201ENST00000340677 A8MWV9 139 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 PSMB2P49721 201 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 SBSPONQ8IVN8 264 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 TANC2Q9HCD6 1990 aa13.5□□□□□ -0.25
CDK11B-201ENST00000340677 HEATR1Q9H583 2144 aaKnown RBP13.49□□□□□ -0.25
CDK11B-201ENST00000340677 C9JCJ5 164 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 TMEM178BH3BS89 294 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 LTAP01374 205 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 PF4P02776 101 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 SLC25A10Q9UBX3 287 aaPredicted RBP13.49□□□□□ -0.25
CDK11B-201ENST00000340677 HHLA3Q9XRX5 114 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 PCBD1P61457 104 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 PMVKQ15126 192 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 C20orf173Q96LM9 149 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 FOXB1Q99853 325 aa13.49□□□□□ -0.25
CDK11B-201ENST00000340677 NDUFS7O75251 213 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 METRNQ9UJH8 293 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 A0A0U1RQV1 116 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 C3orf85A0A1B0GTC6 90 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 K7EM74 188 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
CDK11B-201ENST00000340677 NPIPB3Q92617 1050 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 ZNF747Q9BV97 191 aa13.48□□□□□ -0.25
CDK11B-201ENST00000340677 C5orf63A6NC05 138 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 HBG1P69891 147 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 HBG2P69892 147 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 C3orf36Q3SXR2 165 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 LYRM7Q5U5X0 104 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 C6orf201Q7Z4U5 140 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 HDHD3Q9BSH5 251 aaPredicted RBP13.47□□□□□ -0.25
CDK11B-201ENST00000340677 OSTCQ9NRP0 149 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 CRYGAP11844 174 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 CCL1P22362 96 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 MORN3Q6PF18 240 aaPredicted RBP13.47□□□□□ -0.25
CDK11B-201ENST00000340677 ABHD12Q8N2K0 398 aa13.47□□□□□ -0.25
CDK11B-201ENST00000340677 TRAV2A0A0B4J234 112 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 COX5AP20674 150 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 MFAP2P55001 183 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 KRTAP27-1Q3LI81 207 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 Q6ZR03 302 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 POM121L12Q8N7R1 296 aa13.46□□□□□ -0.25
CDK11B-201ENST00000340677 ZNF837Q96EG3 531 aaPredicted RBP13.46□□□□□ -0.25
CDK11B-201ENST00000340677 IGKV1-9A0A0C4DH69 117 aa13.46□□□□□ -0.26
CDK11B-201ENST00000340677 SS18L1O75177 396 aaPredicted RBP13.46□□□□□ -0.26
CDK11B-201ENST00000340677 SPINK2P20155 84 aa13.46□□□□□ -0.26
CDK11B-201ENST00000340677 RPL30P62888 115 aaKnown RBP13.46□□□□□ -0.26
CDK11B-201ENST00000340677 RFESDQ8TAC1 157 aa13.46□□□□□ -0.26
CDK11B-201ENST00000340677 Q96MF0 132 aa13.46□□□□□ -0.26
CDK11B-201ENST00000340677 EPDR1Q9UM22 224 aa13.46□□□□□ -0.26
CDK11B-201ENST00000340677 C15orf62A8K5M9 175 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 TXNDC17Q9BRA2 123 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 NCOR2Q9Y618 2525 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 IGLV3-1P01715 115 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 CRYGSP22914 178 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 TMEM258P61165 79 aa13.45□□□□□ -0.26
CDK11B-201ENST00000340677 CEMP1Q6PRD7 247 aaPredicted RBP13.45□□□□□ -0.26
CDK11B-201ENST00000340677 SPTSSAQ969W0 71 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms