RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 CCL3L1P16619 93 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 LIME1Q9H400 295 aa10.61□□□□□ -0.71
USP47-202ENST00000339865 DOPEY1Q5JWR5 2465 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 DAD1P61803 113 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 NDPQ00604 133 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 FAM166AQ6J272 317 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 MAPK1IP1LQ8NDC0 245 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 Q8TAT8 98 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
USP47-202ENST00000339865 SLC25A16P16260 332 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 Q6ZT83 130 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 SH2D1AO60880 128 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 FAM104BQ5XKR9 115 aa10.6□□□□□ -0.71
USP47-202ENST00000339865 GLRX5Q86SX6 157 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 C1QTNF4Q9BXJ3 329 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 MORN2Q502X0 79 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 VSIRQ9H7M9 311 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 EXPH5Q8NEV8 1989 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 DSCAMO60469 2012 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 TEX48A0A1B0GUV7 120 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 A0A1B0GWJ7 208 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 COX5BP10606 129 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 SPANXCQ9NY87 97 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 C15orf32Q32M92 178 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 F5H768 121 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 NEGR1Q7Z3B1 354 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 FBLIM1Q8WUP2 373 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 KIAA1551Q9HCM1 1747 aa10.59□□□□□ -0.71
USP47-202ENST00000339865 LINC01551Q86U37 167 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 CD160O95971 181 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 C15orf53Q8NAA6 179 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 ZNF501Q96CX3 271 aaPredicted RBP10.58□□□□□ -0.72
USP47-202ENST00000339865 TMEM131Q92545 1883 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 KLF5Q13887 457 aaPredicted RBP10.58□□□□□ -0.72
USP47-202ENST00000339865 CARD19Q96LW7 228 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 AGMATQ9BSE5 352 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 IGHMP01871 453 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 BRCA1P38398 1863 aaKnown RBP10.58□□□□□ -0.72
USP47-202ENST00000339865 SONP18583 2426 aaKnown RBP10.58□□□□□ -0.72
USP47-202ENST00000339865 TIMM23O14925 209 aa10.58□□□□□ -0.72
USP47-202ENST00000339865 IGKV1-8A0A0C4DH67 115 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 YPEL1O60688 119 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 KLHL30-AS1Q8NEE0 82 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 YPEL2Q96QA6 119 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 CECR9P0C854 216 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 IGKV1D-13A0A0B4J2D9 117 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 NXPH4O95158 308 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 IGKV1-13P0DP09 117 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 A0A1W2PPM0 123 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 DEFB130BP0DP73 79 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 DEFB130AP0DP74 79 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 CFHR3Q02985 330 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 NEU4Q8WWR8 484 aaPredicted RBP10.57□□□□□ -0.72
USP47-202ENST00000339865 SMIM2Q9BVW6 85 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 SEC61GP60059 68 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 UBE2BP63146 152 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 FAM27E3Q08E93 113 aa10.57□□□□□ -0.72
USP47-202ENST00000339865 LY75O60449 1722 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 LRCOL1A6NCL2 159 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 CFHR1Q03591 330 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 WFDC1Q9HC57 220 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 IGHV4-28A0A0C4DH34 117 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 GNLYP22749 145 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 TMEM219Q86XT9 240 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 MRPL27Q9P0M9 148 aaKnown RBP10.56□□□□□ -0.72
USP47-202ENST00000339865 K7ERJ3 54 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 MRPL23Q16540 153 aaKnown RBP10.56□□□□□ -0.72
USP47-202ENST00000339865 LINC01590Q5TEZ4 76 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 SPATA25Q9BR10 227 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 CEND1Q8N111 149 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 CTSBP07858 339 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 ZNF497Q6ZNH5 498 aa10.56□□□□□ -0.72
USP47-202ENST00000339865 TMEM133Q9H2Q1 129 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 SIGLEC1Q9BZZ2 1709 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 LCTP09848 1927 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 CELA3BP08861 270 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 PSG7Q13046 419 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 POLR3KQ9Y2Y1 108 aaPredicted RBP10.55□□□□□ -0.72
USP47-202ENST00000339865 TP53TG1Q9Y2A0 90 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 PLXNA2O75051 1894 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 CXCL10P02778 98 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 KLHDC3Q9BQ90 382 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 OR11H6Q8NGC7 330 aa10.55□□□□□ -0.72
USP47-202ENST00000339865 SPATA31B1PQ5VZV4 182 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 LINC00477Q96M19 166 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 PRCDQ00LT1 54 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 RNF114Q9Y508 228 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 IGHV3-16A0A0C4DH30 117 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 TFF1P04155 84 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 MPZP25189 248 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 IGFBP3P17936 291 aaPredicted RBP10.54□□□□□ -0.72
USP47-202ENST00000339865 SPSB3Q6PJ21 355 aa10.54□□□□□ -0.72
USP47-202ENST00000339865 TRAV13-2A0A0B4J235 113 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 CRYGCP07315 174 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 USP54Q70EL1 1684 aa10.53□□□□□ -0.72
USP47-202ENST00000339865 PLXNB3Q9ULL4 1909 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms