RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 UHRF2Q96PU4 802 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 SHANK2-AS3Q9BTD1 123 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 TRAV12-2A0A075B6T6 113 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 TRAV8-2A0A0B4J237 113 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 CCNKO75909 580 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 PRB4P10163 310 aaPredicted RBP13.81□□□□□ -0.2
ITGA4-202ENST00000339307 HIST1H1AQ02539 215 aaPredicted RBP13.81□□□□□ -0.2
ITGA4-202ENST00000339307 IL15RAQ13261 267 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 TMEM88Q6PEY1 159 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 BAP18Q8IXM2 172 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 SMIM8Q96KF7 97 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 NMES1Q9C002 83 aa13.81□□□□□ -0.2
ITGA4-202ENST00000339307 GOSR2O14653 212 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 DEFB130BP0DP73 79 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 DEFB130AP0DP74 79 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 S100A7AQ86SG5 101 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 OR10P1Q8NGE3 313 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 ARL6Q9H0F7 186 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 MGAT4CQ9UBM8 478 aa13.8□□□□□ -0.2
ITGA4-202ENST00000339307 MBPP02686 304 aaPredicted RBP13.79□□□□□ -0.2
ITGA4-202ENST00000339307 HTN1P15515 57 aa13.79□□□□□ -0.2
ITGA4-202ENST00000339307 SELENOTP62341 195 aa13.79□□□□□ -0.2
ITGA4-202ENST00000339307 NPVFQ9HCQ7 196 aa13.79□□□□□ -0.2
ITGA4-202ENST00000339307 RTL8CO15255 209 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 TSC22D2O75157 780 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 DLK1P80370 383 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 SLC38A11Q08AI6 406 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 LGALS9BQ3B8N2 356 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 ASB13Q8WXK3 278 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 LINC01587Q99440 93 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 MED28Q9H204 178 aa13.78□□□□□ -0.2
ITGA4-202ENST00000339307 DNAH6Q9C0G6 4158 aa13.77□□□□□ -0.2
ITGA4-202ENST00000339307 PMS2P5A8MQ11 134 aa13.77□□□□□ -0.21
ITGA4-202ENST00000339307 A8MTW9 85 aa13.77□□□□□ -0.21
ITGA4-202ENST00000339307 BOLA2-SMG1P6H3BVE0 249 aa13.77□□□□□ -0.21
ITGA4-202ENST00000339307 CRXO43186 299 aaPredicted RBP13.77□□□□□ -0.21
ITGA4-202ENST00000339307 SNRPCP09234 159 aaKnown RBP13.77□□□□□ -0.21
ITGA4-202ENST00000339307 PVALBP20472 110 aaPredicted RBP13.77□□□□□ -0.21
ITGA4-202ENST00000339307 B2MP61769 119 aa13.77□□□□□ -0.21
ITGA4-202ENST00000339307 TEPPQ6URK8 271 aa13.77□□□□□ -0.21
ITGA4-202ENST00000339307 RCL1Q9Y2P8 373 aaKnown RBP13.77□□□□□ -0.21
ITGA4-202ENST00000339307 HERC2O95714 4834 aa13.76□□□□□ -0.21
ITGA4-202ENST00000339307 K7EPK0 472 aa13.76□□□□□ -0.21
ITGA4-202ENST00000339307 OR8A1Q8NGG7 326 aa13.76□□□□□ -0.21
ITGA4-202ENST00000339307 ATG101Q9BSB4 218 aa13.76□□□□□ -0.21
ITGA4-202ENST00000339307 ARV1Q9H2C2 271 aa13.76□□□□□ -0.21
ITGA4-202ENST00000339307 F5H768 121 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 L7N2F9 121 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 RLN2P04090 185 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 CXCL3P19876 107 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 AZU1P20160 251 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 H2BFSP57053 126 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 PLP1P60201 277 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 VAMP2P63027 116 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 FCN2Q15485 313 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 PSG3Q16557 428 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 RNF212Q495C1 297 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 TMEM14EPQ6UXP3 125 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 HECTD4Q9Y4D8 3996 aa13.75□□□□□ -0.21
ITGA4-202ENST00000339307 A0A1B0GVY2 172 aa13.74□□□□□ -0.21
ITGA4-202ENST00000339307 LYRM9A8MSI8 78 aa13.74□□□□□ -0.21
ITGA4-202ENST00000339307 RAB32Q13637 225 aa13.74□□□□□ -0.21
ITGA4-202ENST00000339307 SOHLH1Q5JUK2 328 aa13.74□□□□□ -0.21
ITGA4-202ENST00000339307 RNF24Q9Y225 148 aa13.74□□□□□ -0.21
ITGA4-202ENST00000339307 SIX6O95475 246 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 PET100P0DJ07 73 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 PATE2Q6UY27 113 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 LINC00305Q7Z4B0 112 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 RPUSD4Q96CM3 377 aaKnown RBP13.73□□□□□ -0.21
ITGA4-202ENST00000339307 LSM5Q9Y4Y9 91 aaKnown RBP13.73□□□□□ -0.21
ITGA4-202ENST00000339307 A0A087X0K7 114 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 AGPAT2O15120 278 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 COX7A2P2O60397 106 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 NUDT3O95989 172 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 BCAP31P51572 246 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 S100A10P60903 97 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 ZNF546Q86UE3 836 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 C15orf53Q8NAA6 179 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 C11orf1Q9H5F2 150 aa13.73□□□□□ -0.21
ITGA4-202ENST00000339307 FNDC10F2Z333 226 aa13.72□□□□□ -0.21
ITGA4-202ENST00000339307 H3BTX0 84 aa13.72□□□□□ -0.21
ITGA4-202ENST00000339307 PPP1R1CQ8WVI7 109 aa13.72□□□□□ -0.21
ITGA4-202ENST00000339307 E5RGE8 158 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 TAS2R60P59551 318 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 ARL16Q0P5N6 197 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 C1orf134Q5TEV5 83 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 PXDC1Q5TGL8 231 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 Q6ZR54 194 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 TMEM256Q8N2U0 113 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 GGACTQ9BVM4 153 aa13.71□□□□□ -0.22
ITGA4-202ENST00000339307 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.22
ITGA4-202ENST00000339307 KIAA1109Q2LD37 5005 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 ATP5G1P05496 136 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 GIPP09681 153 aaPredicted RBP13.7□□□□□ -0.22
ITGA4-202ENST00000339307 TSPOP30536 169 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 CDKN1BP46527 198 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 ATP5G3P48201 142 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 LCN15Q6UWW0 184 aa13.7□□□□□ -0.22
ITGA4-202ENST00000339307 BPIFA4PQ86YQ2 179 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms