RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GSKIPQ9P0R6 139 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 IGLV2-18A0A075B6J9 118 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 A8MTW9 85 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 ZNF705GA8MUZ8 300 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-202ENST00000337571 H3BRN7 92 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 M0R2Z0 102 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 GOSR2O14653 212 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 HIST1H1AQ02539 215 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-202ENST00000337571 ASAH1Q13510 395 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 XP32Q5T750 250 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 TEPPQ6URK8 271 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 AMTNQ6UX39 209 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 LINC01587Q99440 93 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 ATG101Q9BSB4 218 aa7.57□□□□□ -1.2
CAPN3-202ENST00000337571 TRAV8-2A0A0B4J237 113 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 LYRM9A8MSI8 78 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 FNDC10F2Z333 226 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 BOLA2-SMG1P6H3BVE0 249 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 METTL15P1P0C7V9 234 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 DEFB130BP0DP73 79 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 DEFB130AP0DP74 79 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 HTN1P15515 57 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 BTCP35070 178 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 TAS2R30P59541 319 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 PLP1P60201 277 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 DLK1P80370 383 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 IAH1Q2TAA2 248 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-202ENST00000337571 PXDC1Q5TGL8 231 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 TMEM88Q6PEY1 159 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 TMEM256Q8N2U0 113 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 C15orf53Q8NAA6 179 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 C17orf77Q96MU5 243 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 UHRF2Q96PU4 802 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 FLVCR2Q9UPI3 526 aa7.56□□□□□ -1.2
CAPN3-202ENST00000337571 TRAV12-2A0A075B6T6 113 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 TMEM238LA0A1B0GVL6 79 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 L7N2F9 121 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 TSC22D2O75157 780 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 TSPOP30536 169 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 VAMP2P63027 116 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 PSG3Q16557 428 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 RGS21Q2M5E4 152 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 TMEM14EPQ6UXP3 125 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 NRARPQ7Z6K4 114 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 ZNF546Q86UE3 836 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 OR8A1Q8NGG7 326 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 KRTAP17-1Q9BYP8 105 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 ARV1Q9H2C2 271 aa7.55□□□□□ -1.2
CAPN3-202ENST00000337571 A0A087X0K7 114 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 PMS2P5A8MQ11 134 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 F5H768 121 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 K7EPK0 472 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 RTL8CO15255 209 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 CRXO43186 299 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-202ENST00000337571 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 PRM2P04554 102 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 ATP5G1P05496 136 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 CXCL3P19876 107 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 ATP5G3P48201 142 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 FAM3BP58499 235 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-202ENST00000337571 SLC38A11Q08AI6 406 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 RAB31Q13636 194 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 C1orf134Q5TEV5 83 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 LCN15Q6UWW0 184 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 LINC00305Q7Z4B0 112 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 BAP18Q8IXM2 172 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 ZBTB8BQ8NAP8 495 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-202ENST00000337571 RPUSD4Q96CM3 377 aaKnown RBP7.54□□□□□ -1.2
CAPN3-202ENST00000337571 GGACTQ9BVM4 153 aa7.54□□□□□ -1.2
CAPN3-202ENST00000337571 A0A1B0GVY2 172 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 CBY3A6NI87 242 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 AGPAT2O15120 278 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 CCNKO75909 580 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 NUDT3O95989 172 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 CXCL2P19875 107 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 AZU1P20160 251 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 CDKN1BP46527 198 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 BCAP31P51572 246 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 TAS2R60P59551 318 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 FCN2Q15485 313 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 PATE2Q6UY27 113 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 Q6ZRG5 221 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 CCDC28AQ8IWP9 274 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 OR10J6PQ8NGY7 276 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 MITD1Q8WV92 249 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 C16orf74Q96GX8 76 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 TIMM8BQ9Y5J9 83 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-202ENST00000337571 HERC2O95714 4834 aa7.53□□□□□ -1.2
CAPN3-202ENST00000337571 C7orf66A4D0T2 115 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 FAM25EA8MYX2 175 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 EIF4EBP3O60516 100 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-202ENST00000337571 PTTG1O95997 202 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 MBPP02686 304 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-202ENST00000337571 CCL18P55774 89 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 C10orf113Q5VZT2 155 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 ZNF493Q6ZR52 646 aa7.52□□□□□ -1.21
CAPN3-202ENST00000337571 Q6ZR54 194 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms